Best Alignments for T0627

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qcxA	4.7541e-31	2qcxA/T0627-2qcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z72A	1.4543e-27	1z72A/T0627-1z72A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1tyhA	7.5826e-27	1tyhA/T0627-1tyhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2rd3A	2.6259e-26	2rd3A/T0627-2rd3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yakA	3.3692e-26	1yakA/T0627-1yakA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3hmlA	3.6676e-26	3hmlA/T0627-3hmlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hlxA	6.1667e-26	3hlxA/T0627-3hlxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3mvuA	2.0284e-25	3mvuA/T0627-3mvuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q4xA	2.1314e-25	2q4xA/T0627-2q4xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1rcwA	2.7304e-24	1rcwA/T0627-1rcwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.4
1uddA	3.7940e-24	1uddA/T0627-1uddA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3ibxA	4.4753e-24	3ibxA/T0627-3ibxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qzcA	8.2419e-24	2qzcA/T0627-2qzcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1otvA	1.0576e-23	1otvA/T0627-1otvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.4
2f2gA	2.6723e-23	2f2gA/T0627-2f2gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3hnhA	4.5384e-22	3hnhA/T0627-3hnhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rtwA	5.5168e-21	1rtwA/T0627-1rtwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3ddeA	1.8668e-20	3ddeA/T0627-3ddeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a2mA	5.2771e-20	2a2mA/T0627-2a2mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1wwmA	2.5383e-19	1wwmA/T0627-1wwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001