Best Alignments for T0627

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rcwA/T0627-1rcwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rcwA/T0627-1rcwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9071e-283.10e-95 a.132.1.4
2qzcA/T0627-2qzcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qzcA/T0627-2qzcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5245e-214.88e-78
3mvuA/T0627-3mvuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3mvuA/T0627-3mvuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3120e-192.31e-84
2rd3A/T0627-2rd3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2rd3A/T0627-2rd3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9072e-173.15e-75
3ibxA/T0627-3ibxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ibxA/T0627-3ibxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1424e-178.30e-73
1yakA/T0627-1yakA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yakA/T0627-1yakA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9464e-161.72e-67 a.132.1.3
2qcxA/T0627-2qcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qcxA/T0627-2qcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2161e-159.67e-66
3ddeA/T0627-3ddeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ddeA/T0627-3ddeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8037e-126.19e-59
3hlxA/T0627-3hlxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hlxA/T0627-3hlxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9999e-071.11e-43
3hmlA/T0627-3hmlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hmlA/T0627-3hmlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6538e-071.64e-46

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001