Best Alignments for T0627

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2qcxA/T0627-2qcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qcxA/T0627-2qcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9088e-253.56e-95
1yakA/T0627-1yakA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yakA/T0627-1yakA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2267e-238.37e-99 a.132.1.3
2rd3A/T0627-2rd3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2rd3A/T0627-2rd3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2744e-224.93e-93
3mvuA/T0627-3mvuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3mvuA/T0627-3mvuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1822e-222.93e-93
3ibxA/T0627-3ibxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ibxA/T0627-3ibxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5910e-212.13e-94
3hmlA/T0627-3hmlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hmlA/T0627-3hmlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0786e-212.18e-95
3hlxA/T0627-3hlxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hlxA/T0627-3hlxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9852e-211.62e-88
1otvA/T0627-1otvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1otvA/T0627-1otvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2414e-203.18e-82 a.132.1.4
3hnhA/T0627-3hnhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hnhA/T0627-3hnhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6488e-193.13e-84
2qzcA/T0627-2qzcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qzcA/T0627-2qzcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6270e-187.17e-76

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001