# List of top-scoring protein chains for t04-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1hf8A	289	7.815	a.7.8.2,a.118.9.3	90354,90355
2ac2A	309	9.364		
1x8gA	227	11.66	d.157.1.1	114960
1uok	558	13.84		
1qx4A	274	21.63	b.43.4.2,c.25.1.1	104624,104625
1b5tA	275	22.06	c.1.23.1	29676
1q2zA	120	27.69	a.118.19.1	95656
2e7jA	371	30.84	c.67.1.9	146704
1rw2A	152	32.29	a.118.19.1	97961
2czcA	334	35.10	d.81.1.1,c.2.1.3	131044,145052
1w77A	228	39.31	c.68.1.13	120679
3lbxA	161	39.87		
1t7sA	137	45.36	a.7.7.1	106636
1u8tA	129	45.52	c.23.1.1	113192
2rfjA	120	47.71		
2dmeA	120	49.14		
2h1vA	310	50.68		
2w43A	201	50.97		
1vfrA	218	52.27	d.90.1.1	40247
3e15A	312	52.37		
2h58A	330	58.81		
3ifvA	247	61.72		
3dc4A	344	63.69		
1d2dA	59	63.90	a.16.1.3	16397
3hmfA	116	64.07		
1umkA	275	66.17	b.43.4.2,c.25.1.1	113312,113313
1xteA	154	67.99	d.189.1.1	116017
1m22A	503	70.41	c.117.1.1	78464
3js8A	540	72.38		
2ac4A	309	74.90		
1bgvA	449	78.14	c.2.1.7,c.58.1.1	30217,33865
1wuiL	534	80.12	e.18.1.1	121289
1aq0A	306	85.91	c.1.8.3	28842
2rgmA	481	87.96		
2iy9A	347	88.15		
3cf6E	694	88.31