Best Alignments for T0618

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1h6gA/T0618-1h6gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h6gA/T0618-1h6gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8646e+001.26e-05 1h6gA a.24.9.1
a.24.9.1
2dpmA/T0618-2dpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dpmA/T0618-2dpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7330e+011.49e-10 2dpmA c.66.1.28
2lbd/T0618-2lbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2lbd/T0618-2lbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8145e+016.82e-11 2lbd
2uytA/T0618-2uytA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2uytA/T0618-2uytA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1624e+012.09e+04
2p3nA/T0618-2p3nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2p3nA/T0618-2p3nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4856e+013.33e-04
3l1bA/T0618-3l1bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3l1bA/T0618-3l1bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6167e+011.16e-12
104lA/T0618-104lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 104lA/T0618-104lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7014e+014.07e-06 1l92 d.2.1.3
3kraB/T0618-3kraB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kraB/T0618-3kraB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9714e+013.32e-11
3kezA/T0618-3kezA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kezA/T0618-3kezA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2552e+016.29e+00
2z51A/T0618-2z51A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2z51A/T0618-2z51A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3356e+019.60e-05

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001