PFRMAT SS
TARGET T0618
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0618.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 36
METHOD
MODEL 1
M C 0.776
K C 0.476
K H 0.427
E H 0.492
S H 0.441
Q H 0.536
V H 0.547
I H 0.455
F H 0.593
D H 0.773
K H 0.942
N H 0.967
V H 0.991
I H 0.994
E H 0.993
F H 0.994
V H 0.999
T H 0.998
V H 0.998
A H 0.997
A H 0.991
E H 0.989
F H 0.981
C H 0.947
A H 0.846
F H 0.789
L H 0.745
E H 0.682
R H 0.543
A H 0.560
E H 0.447
S H 0.463
M H 0.414
K C 0.465
R H 0.749
S H 0.746
T H 0.783
F H 0.946
V H 0.971
D H 0.974
T H 0.984
T H 0.988
L H 0.983
K H 0.971
I H 0.961
L H 0.952
P H 0.909
L H 0.912
L H 0.884
Y H 0.815
L H 0.720
K H 0.670
A H 0.572
S C 0.347
M C 0.522
L C 0.651
P C 0.624
K C 0.345
C C 0.330
E C 0.426
M C 0.588
I C 0.370
G T 0.356
D T 0.426
E T 0.417
S C 0.657
P C 0.696
E C 0.588
T C 0.566
Y C 0.573
V C 0.711
T C 0.762
E H 0.786
E H 0.846
I H 0.902
Y H 0.959
E H 0.978
V H 0.979
L H 0.974
R H 0.959
I H 0.957
N H 0.958
L H 0.941
A H 0.891
S H 0.857
I H 0.843
L H 0.572
A C 0.867
E C 0.475
K T 0.315
D T 0.338
D H 0.331
Y H 0.620
L H 0.549
E H 0.549
V H 0.428
F C 0.416
L C 0.503
P T 0.368
D G 0.536
M G 0.529
A T 0.384
Y T 0.539
S T 0.695
D T 0.580
E C 0.569
P C 0.684
I C 0.501
K C 0.426
K C 0.624
N C 0.502
I H 0.724
S H 0.801
E H 0.798
D H 0.782
L H 0.962
A H 0.969
D H 0.960
I H 0.982
Y H 0.979
Q H 0.954
D H 0.933
I H 0.983
K H 0.993
D H 0.994
F H 0.989
I H 0.995
F H 0.992
V H 0.988
F H 0.978
Q H 0.955
L H 0.878
G C 0.462
L H 0.360
N H 0.464
E H 0.623
T H 0.673
M H 0.950
N H 0.975
D H 0.991
S H 0.992
L H 0.999
A H 0.999
I H 0.998
C H 0.998
Q H 0.997
E H 0.994
N H 0.978
F H 0.890
G H 0.845
L H 0.886
L H 0.854
W H 0.963
G H 0.968
Q H 0.986
K H 0.988
L H 0.998
V H 0.998
N H 0.999
T H 0.998
M H 0.998
R H 0.993
A H 0.992
L H 0.990
H H 0.978
D H 0.935
V H 0.906
K H 0.813
Y H 0.811
S H 0.588
P H 0.511
K H 0.564
A H 0.496
R H 0.429
L H 0.464
E H 0.521
H H 0.573
H H 0.528
H H 0.517
H C 0.372
H C 0.560
H C 0.960
END