Best Alignments for T0617

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3cjnA/T0617-3cjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cjnA/T0617-3cjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6017e-173.49e-68
2a61A/T0617-2a61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0617-2a61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6970e-173.92e-69 a.4.5.28
3bpvA/T0617-3bpvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bpvA/T0617-3bpvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4131e-163.57e-67
2rdpA/T0617-2rdpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2rdpA/T0617-2rdpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3783e-162.26e-70
2nnnA/T0617-2nnnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nnnA/T0617-2nnnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6533e-161.30e-66
2fa5A/T0617-2fa5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fa5A/T0617-2fa5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6395e-164.61e-64
2pexA/T0617-2pexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pexA/T0617-2pexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2523e-154.38e-59
3ecoA/T0617-3ecoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ecoA/T0617-3ecoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3683e-151.22e-65
3gfmA/T0617-3gfmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3gfmA/T0617-3gfmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3907e-153.06e-67
3e6mA/T0617-3e6mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e6mA/T0617-3e6mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5818e-151.21e-60

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001