Best Alignments for T0615

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1vj7A	1.1438e-22	1vj7A/T0615-1vj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1 d.218.1.8
2qgsA	1.7004e-01	2qgsA/T0615-2qgsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
3b57A	4.4077e-01	3b57A/T0615-3b57A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2ogiA	6.3349e-01	2ogiA/T0615-2ogiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gz4A	7.0738e-01	2gz4A/T0615-2gz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2o08A	1.1809e+00	2o08A/T0615-2o08A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pq7A	1.4293e+00	2pq7A/T0615-2pq7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2parA	4.1188e+00	2parA/T0615-2parA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ccgA	4.1506e+00	3ccgA/T0615-3ccgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vqrA	7.1114e+00	1vqrA/T0615-1vqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.3
1xx7A	7.5664e+00	1xx7A/T0615-1xx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
3kh1A	8.4252e+00	3kh1A/T0615-3kh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3mzoA	1.5182e+01	3mzoA/T0615-3mzoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3memA	1.7535e+01	3memA/T0615-3memA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3m1tA	1.7941e+01	3m1tA/T0615-3m1tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ynbA	1.8096e+01	1ynbA/T0615-1ynbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2paqA	3.1581e+01	2paqA/T0615-2paqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
1xjjA	3.4041e+01	1xjjA/T0615-1xjjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ljxA	3.8103e+01	3ljxA/T0615-3ljxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hc1A	4.4394e+01	3hc1A/T0615-3hc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001