Best Alignments for T0615

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1vj7A	2.8482e-24	1vj7A/T0615-1vj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1 d.218.1.8
2qgsA	4.4582e-01	2qgsA/T0615-2qgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2gz4A	1.3088e+00	2gz4A/T0615-2gz4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
3b57A	2.3546e+00	3b57A/T0615-3b57A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2pq7A	3.6039e+00	2pq7A/T0615-2pq7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2ogiA	4.5995e+00	2ogiA/T0615-2ogiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2parA	6.0590e+00	2parA/T0615-2parA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o08A	6.1609e+00	2o08A/T0615-2o08A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xx7A	1.1564e+01	1xx7A/T0615-1xx7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
3ccgA	1.5294e+01	3ccgA/T0615-3ccgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hc1A	1.7616e+01	3hc1A/T0615-3hc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2paqA	1.9787e+01	2paqA/T0615-2paqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
1vqrA	2.1075e+01	1vqrA/T0615-1vqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.3
1yoyA	3.1075e+01	1yoyA/T0615-1yoyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3mzoA	3.2889e+01	3mzoA/T0615-3mzoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3igfA	3.6393e+01	3igfA/T0615-3igfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3m1tA	3.8181e+01	3m1tA/T0615-3m1tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ynbA	4.3281e+01	1ynbA/T0615-1ynbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dqbA	4.3459e+01	2dqbA/T0615-2dqbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3kh1A	5.0974e+01	3kh1A/T0615-3kh1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001