# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1vj7A	393	3.95e-20	a.211.1.1,d.218.1.8	100801,100802
2qgsA	225	0.04714	a.211.1.1	150782
2ogiA	196	0.4222		
2o08A	188	0.4572		
2gz4A	207	0.5795	a.211.1.1	147196
2parA	201	0.9752		
2pq7A	220	1.330	a.211.1.1	149786
1vqrA	297	1.665	a.211.1.3	114015
3b57A	209	2.443	a.211.1.1	154835
3mzoA	216	3.601		
3ccgA	190	3.701		
3kh1A	200	5.508		
1xx7A	184	6.377	a.211.1.1	116143
1ynbA	173	8.929	a.211.1.1	123718
2paqA	201	12.32	a.211.1.1	139643
3l6eA	235	16.16		
3kzvA	254	19.93		
3m1tA	275	22.54		
3et4A	255	24.15		
2ar1A	172	28.42	b.122.1.8	127187
3i7aA	281	30.60		
3m5fA	244	33.72		
1yo6A	250	36.97	c.2.1.2	123769
1e6wA	260	41.85	c.2.1.2	59326
2weeA	197	42.70		
2z5kA	890	44.06		
3h52A	254	44.77		
1bdbA	277	48.85	c.2.1.2	29874
1dd9A	338	50.10	e.13.1.1	43254
2bnlA	136	52.32		
3ljxA	288	52.71		
1uozA	315	59.81	c.6.1.1	113354
3b55A	451	64.69	c.150.1.3	154832
2zjdA	130	65.19	d.15.1.3	154484
3eciA	122	68.78		
1hbnC	248	70.57	d.58.31.1	60902
2au3A	407	81.46		
1lbu	213	81.91		
1lt8A	406	83.20	c.1.26.1	78186
2wawA	199	83.59		
2kh9A	92	87.73