# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1vj7A	393	1.50e-20	a.211.1.1,d.218.1.8	100801,100802
2gz4A	207	0.2833	a.211.1.1	147196
2qgsA	225	0.3083	a.211.1.1	150782
2o08A	188	0.6527		
3b57A	209	1.019	a.211.1.1	154835
2ogiA	196	1.147		
3m1tA	275	2.174		
1t7rA	269	2.601	a.123.1.1	106635
3mjdA	232	3.707		
2pq7A	220	3.956	a.211.1.1	149786
1xx7A	184	4.844	a.211.1.1	116143
1ynbA	173	5.463	a.211.1.1	123718
2ax8A	256	6.513		
2ax6A	256	7.260	a.123.1.1	127479
2bvwA	362	11.45	c.6.1.1	30666
1vqrA	297	17.37	a.211.1.3	114015
1oc7A	364	17.55	c.6.1.1	86794
3i7aA	281	20.52		
1sr7A	259	24.32	a.123.1.1	105957
3et4A	255	31.69		
2aaxA	275	36.16		
2ac2A	309	42.12		
1tdpA	111	43.82	a.29.8.1	106781
2yvlA	248	44.07		
2parA	201	46.87		
1sqnA	261	50.59	a.123.1.1	105944
3lypA	215	53.79		
3hc1A	305	58.42		
2veoA	441	61.41		
1jf9A	408	61.57	c.67.1.3	62931
1a28A	256	62.83	a.123.1.1	19290
2a8eA	220	70.72	d.296.1.1	126397
3memA	457	71.72		
1k07A	263	74.20	d.157.1.1	77218
2i33A	258	76.71		
3mzoA	216	82.90		
1rg9A	383	83.11	d.130.1.1,d.130.1.1,d.130.1.1	97427,97428,97429