Best Alignments for T0611

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3dcfA/T0611-3dcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3dcfA/T0611-3dcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3046e-182.85e-80
1vi0A/T0611-1vi0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vi0A/T0611-1vi0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7787e-172.26e-75 a.4.1.9
a.121.1.1
3lhqA/T0611-3lhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lhqA/T0611-3lhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1616e-177.90e-74
3bruA/T0611-3bruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bruA/T0611-3bruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3530e-171.74e-67
2xdnA/T0611-2xdnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2xdnA/T0611-2xdnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1424e-161.24e-72
3bcgA/T0611-3bcgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bcgA/T0611-3bcgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3086e-161.63e-65
3himA/T0611-3himA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3himA/T0611-3himA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4525e-168.01e-76
2w53A/T0611-2w53A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2w53A/T0611-2w53A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5314e-161.60e-64
3knwA/T0611-3knwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3knwA/T0611-3knwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2537e-164.08e-72
2uxuA/T0611-2uxuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2uxuA/T0611-2uxuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5367e-162.32e-69

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001