(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0602
    • gi|170019736|ref|YP_001724690.1|_1:120 flagellar biosynthesis protein FliT [Escherichia coli ATCC 8739]
    • gi|215275232|sp|B1IZX8|FLIT_ECOLC RecName: Full=Flagellar protein fliT [Taxonomy]
    • gi|169754664|gb|ACA77363.1| flagellar export chaperone [Escherichia coli ATCC 8739]
    • gi|74312464|ref|YP_310883.1|_1:120 flagellar biosynthesis protein FliT [Shigella sonnei Ss046]
    • gi|123616933|sp|Q3Z0R4|FLIT_SHISS RecName: Full=Flagellar protein fliT [Taxonomy]
    • gi|73855941|gb|AAZ88648.1| flagellar repressor of class 3a and 3b operons [Shigella sonnei Ss046]
    • gi|161502916|ref|YP_001570028.1|_1:120 flagellar biosynthesis protein FliT [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--]
    • gi|215275238|sp|A9MML7|FLIT_SALAR RecName: Full=Flagellar protein fliT [Taxonomy]
    • gi|160864263|gb|ABX20886.1| hypothetical protein SARI_00975 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--]
    • gi|295321532|pdb|3A7M|A_1:120 Chain A, Structure Of Flit, The Flagellar Type Iii Chaperone For Flid [Taxonomy]
    • gi|295321533|pdb|3A7M|B Chain B, Structure Of Flit, The Flagellar Type Iii Chaperone For Flid [Taxonomy]
    • gi|157371183|ref|YP_001479172.1|_1:120 flagellar biosynthesis protein FliT [Serratia proteamaculans 568]
    • gi|215275240|sp|A8GG04|FLIT_SERP5 RecName: Full=Flagellar protein fliT [Taxonomy]
    • gi|157322947|gb|ABV42044.1| flagellar export chaperone [Serratia proteamaculans 568]
    • gi|238920306|ref|YP_002933821.1|_1:120 flagellar protein FliT [Edwardsiella ictaluri 93-146]
    • gi|238869875|gb|ACR69586.1| flagellar protein FliT [Edwardsiella ictaluri 93-146]
    • gi|253688950|ref|YP_003018140.1|_1:120 flagellar export chaperone [Pectobacterium carotovorum subsp. carotovorum PC1]
    • gi|259646006|sp|C6D977|FLIT_PECCP RecName: Full=Flagellar protein fliT [Taxonomy]
    • gi|251755528|gb|ACT13604.1| flagellar export chaperone [Pectobacterium carotovorum subsp. carotovorum PC1]
    • gi|152980323|ref|YP_001353136.1|_1:108 FliT flagellar protein [Janthinobacterium sp. Marseille]
    • gi|151280400|gb|ABR88810.1| FliT flagellar protein [Janthinobacterium sp. Marseille]
    • gi|156933467|ref|YP_001437383.1|_1:119 flagellar biosynthesis protein FliT [Cronobacter sakazakii ATCC BAA-894]
    • gi|215275235|sp|A7MJI0|FLIT_ENTS8 RecName: Full=Flagellar protein fliT [Taxonomy]
    • gi|156531721|gb|ABU76547.1| hypothetical protein ESA_01285 [Cronobacter sakazakii ATCC BAA-894]
    • gi|242238979|ref|YP_002987160.1|_1:123 flagellar export chaperone [Dickeya dadantii Ech703]
    • gi|242131036|gb|ACS85338.1| flagellar export chaperone [Dickeya dadantii Ech703]
    • gi|157145275|ref|YP_001452594.1|_1:119 flagellar biosynthesis protein FliT [Citrobacter koseri ATCC BAA-895]
    • gi|215275227|sp|A8AF95|FLIT_CITK8 RecName: Full=Flagellar protein fliT [Taxonomy]
    • gi|157082480|gb|ABV12158.1| hypothetical protein CKO_01012 [Citrobacter koseri ATCC BAA-895]
    • gi|187925737|ref|YP_001897379.1|_1:107 putative flagellar protein FliT [Burkholderia phytofirmans PsJN]
    • gi|187716931|gb|ACD18155.1| putative flagellar protein FliT [Burkholderia phytofirmans PsJN]
    • gi|134297237|ref|YP_001120972.1|_1:110 hypothetical protein Bcep1808_3146 [Burkholderia vietnamiensis G4]
    • gi|134140394|gb|ABO56137.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
    • gi|228312525|pdb|3H3M|A_11:125 Chain A, Crystal Structure Of Flagellar Protein Flit From Bordetella Bronchiseptica [Taxonomy]
    • gi|228312526|pdb|3H3M|B Chain B, Crystal Structure Of Flagellar Protein Flit From Bordetella Bronchiseptica [Taxonomy]
    • gi|115353157|ref|YP_774996.1|_1:110 hypothetical protein Bamb_3106 [Burkholderia ambifaria AMMD]
    • gi|115283145|gb|ABI88662.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
    • gi|296101718|ref|YP_003611864.1|_1:119 flagellar protein FliT [Enterobacter cloacae subsp. cloacae ATCC 13047]
    • gi|295056177|gb|ADF60915.1| flagellar protein FliT [Enterobacter cloacae subsp. cloacae ATCC 13047]
    • gi|295678022|ref|YP_003606546.1|_1:107 putative flagellar protein FliT [Burkholderia sp. CCGE1002]
    • gi|295437865|gb|ADG17035.1| putative flagellar protein FliT [Burkholderia sp. CCGE1002]
    • gi|107023992|ref|YP_622319.1|_1:110 hypothetical protein Bcen_2447 [Burkholderia cenocepacia AU 1054]
    • gi|116691079|ref|YP_836702.1| hypothetical protein Bcen2424_3061 [Burkholderia cenocepacia HI2424]
    • gi|170734413|ref|YP_001766360.1| hypothetical protein Bcenmc03_3080 [Burkholderia cenocepacia MC0-3]
    • gi|105894181|gb|ABF77346.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
    • gi|116649168|gb|ABK09809.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
    • gi|169817655|gb|ACA92238.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
    • gi|261821175|ref|YP_003259281.1|_1:110 flagellar export chaperone [Pectobacterium wasabiae WPP163]
    • gi|261605188|gb|ACX87674.1| flagellar export chaperone [Pectobacterium wasabiae WPP163]
    • gi|78067879|ref|YP_370648.1|_1:110 hypothetical protein Bcep18194_A6410 [Burkholderia sp. 383]
    • gi|77968624|gb|ABB10004.1| hypothetical protein Bcep18194_A6410 [Burkholderia sp. 383]
    • gi|187930206|ref|YP_001900693.1|_12:125 conserved hypothetical protein [Ralstonia pickettii 12J]
    • gi|241664356|ref|YP_002982716.1| flagellar export chaperone [Ralstonia pickettii 12D]
    • gi|187727096|gb|ACD28261.1| conserved hypothetical protein [Ralstonia pickettii 12J]
    • gi|240866383|gb|ACS64044.1| flagellar export chaperone [Ralstonia pickettii 12D]
    • gi|186477675|ref|YP_001859145.1|_1:108 putative flagellar protein FliT [Burkholderia phymatum STM815]
    • gi|184194134|gb|ACC72099.1| putative flagellar protein FliT [Burkholderia phymatum STM815]
    • gi|114330951|ref|YP_747173.1|_11:120 flagellar protein FliT [Nitrosomonas eutropha C91]
    • gi|114307965|gb|ABI59208.1| flagellar protein FliT [Nitrosomonas eutropha C91]
    • gi|187926913|ref|YP_001893258.1|_4:118 putative flagellar protein FliT [Ralstonia pickettii 12J]
    • gi|241665242|ref|YP_002983601.1| flagellar protein FliT [Ralstonia pickettii 12D]
    • gi|187728667|gb|ACD29831.1| putative flagellar protein FliT [Ralstonia pickettii 12J]
    • gi|240867269|gb|ACS64929.1| flagellar protein FliT [Ralstonia pickettii 12D]
    • gi|291617837|ref|YP_003520579.1|_1:118 FliT [Pantoea ananatis LMG 20103]
    • gi|291152867|gb|ADD77451.1| FliT [Pantoea ananatis LMG 20103]
    • gi|271500088|ref|YP_003333113.1|_1:119 flagellar export chaperone [Dickeya dadantii Ech586]
    • gi|270343643|gb|ACZ76408.1| flagellar export chaperone [Dickeya dadantii Ech586]
    • gi|269139479|ref|YP_003296180.1|_1:100 repressor [Edwardsiella tarda EIB202]
    • gi|267985140|gb|ACY84969.1| repressor [Edwardsiella tarda EIB202]
    • gi|251789190|ref|YP_003003911.1|_1:120 flagellar export chaperone [Dickeya zeae Ech1591]
    • gi|247537811|gb|ACT06432.1| flagellar export chaperone [Dickeya zeae Ech1591]
    • gi|73538918|ref|YP_299285.1|_1:108 flagellar protein FliT [Ralstonia eutropha JMP134]
    • gi|72122255|gb|AAZ64441.1| flagellar protein FliT [Ralstonia eutropha JMP134]
    • gi|74317612|ref|YP_315352.1|_1:107 flagellar protein FliT [Thiobacillus denitrificans ATCC 25259]
    • gi|74057107|gb|AAZ97547.1| flagellar protein FliT [Thiobacillus denitrificans ATCC 25259]
    • gi|253998464|ref|YP_003050527.1|_1:106 putative flagellar synthesis (flagellar regulon) [Methylovorus sp. SIP3-4]
    • gi|253985143|gb|ACT50000.1| putative flagellar synthesis (flagellar regulon) [Methylovorus sp. SIP3-4]
    • gi|238028884|ref|YP_002913115.1|_1:109 hypothetical protein bglu_1g33490 [Burkholderia glumae BGR1]
    • gi|237878078|gb|ACR30411.1| Hypothetical protein bglu_1g33490 [Burkholderia glumae BGR1]
    • gi|222112252|ref|YP_002554516.1|_1:96 flagellar protein FliT [Acidovorax ebreus TPSY]
    • gi|221731696|gb|ACM34516.1| flagellar protein FliT [Acidovorax ebreus TPSY]
    • gi|120613033|ref|YP_972711.1|_1:96 flagellar protein FliT [Acidovorax avenae subsp. citrulli AAC00-1]
    • gi|120591497|gb|ABM34937.1| flagellar protein FliT [Acidovorax citrulli AAC00-1]
    • gi|253996295|ref|YP_003048359.1|_1:107 putative flagellar synthesis (flagellar regulon) [Methylotenera mobilis JLW8]
    • gi|253982974|gb|ACT47832.1| putative flagellar synthesis (flagellar regulon) [Methylotenera mobilis JLW8]
    • gi|121596096|ref|YP_987992.1|_1:96 flagellar protein FliT [Acidovorax sp. JS42]
    • gi|120608176|gb|ABM43916.1| flagellar protein FliT [Acidovorax sp. JS42]
    • gi|297538190|ref|YP_003673959.1|_1:107 putative flagellar synthesis (flagellar regulon) [Methylotenera sp. 301]
    • gi|297257537|gb|ADI29382.1| putative flagellar synthesis (flagellar regulon) [Methylotenera sp. 301]
    • gi|160896070|ref|YP_001561652.1|_5:96 flagellar protein FliT [Delftia acidovorans SPH-1]
    • gi|160361654|gb|ABX33267.1| flagellar protein FliT [Delftia acidovorans SPH-1]
    • gi|82702470|ref|YP_412036.1|_2:108 flagellar protein FliT [Nitrosospira multiformis ATCC 25196]
    • gi|82410535|gb|ABB74644.1| flagellar protein FliT [Nitrosospira multiformis ATCC 25196]
    • gi|171057700|ref|YP_001790049.1|_12:111 flagellar chaperone [Leptothrix cholodnii SP-6]
    • gi|170775145|gb|ACB33284.1| flagellar chaperone [Leptothrix cholodnii SP-6]
    • gi|124268048|ref|YP_001022052.1|_4:96 flagellar chaperone [Methylibium petroleiphilum PM1]
    • gi|124260823|gb|ABM95817.1| flagellar chaperone [Methylibium petroleiphilum PM1]
    • gi|89899445|ref|YP_521916.1|_2:96 flagellar protein FliT [Rhodoferax ferrireducens T118]
    • gi|89344182|gb|ABD68385.1| flagellar protein FliT [Rhodoferax ferrireducens T118]
    • gi|264676584|ref|YP_003276490.1|_2:92 flagellar protein FliT [Comamonas testosteroni CNB-2]
    • gi|262207096|gb|ACY31194.1| flagellar protein FliT [Comamonas testosteroni CNB-2]
    • gi|291613086|ref|YP_003523243.1|_4:102 flagellar export chaperone [Sideroxydans lithotrophicus ES-1]
    • gi|291583198|gb|ADE10856.1| flagellar export chaperone [Sideroxydans lithotrophicus ES-1]
    • gi|92114153|ref|YP_574081.1|_1:123 hypothetical protein Csal_2031 [Chromohalobacter salexigens DSM 3043]
    • gi|91797243|gb|ABE59382.1| hypothetical protein Csal_2031 [Chromohalobacter salexigens DSM 3043]
    • gi|121608096|ref|YP_995903.1|_3:90 flagellar protein FliT [Verminephrobacter eiseniae EF01-2]
    • gi|121552736|gb|ABM56885.1| flagellar protein FliT [Verminephrobacter eiseniae EF01-2]
    • gi|226944516|ref|YP_002799589.1|_1:122 flagellar protein [Azotobacter vinelandii DJ]
    • gi|226719443|gb|ACO78614.1| flagellar protein [Azotobacter vinelandii DJ]
    • gi|257092970|ref|YP_003166611.1|_1:94 hypothetical protein CAP2UW1_1358 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
    • gi|257045494|gb|ACV34682.1| hypothetical protein CAP2UW1_1358 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
    • gi|239817132|ref|YP_002946042.1|_4:89 hypothetical protein Vapar_4163 [Variovorax paradoxus S110]
    • gi|239803709|gb|ACS20776.1| hypothetical protein Vapar_4163 [Variovorax paradoxus S110]
    • gi|114319866|ref|YP_741549.1|_15:110 flagellar protein FliT [Alkalilimnicola ehrlichii MLHE-1]
    • gi|114226260|gb|ABI56059.1| flagellar protein FliT [Alkalilimnicola ehrlichii MLHE-1] 
                               10          20        30        40      
                               |           |         |         |      
   1 ...SNA...M....ER....HQH...LLSEYQQI..LTLSEQMLVLATEGNWDALVDLEMT.Y.L
   2 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLMLATEGNWDALVDLEMT.Y.L
   3 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLILATEGKWDALVDLEMT.Y.L
   4 ...---...M....ER....HQH...LLSDYQQI..LTLSEQMLMLATEGNWDALVDLEMT.Y.L
   5 ...---...M....ER....HQH...LLSEYQQI..LTFSEQMLALAIEGNWDALVDLEMT.Y.L
   6 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLMLATEGNWDALVDLEMT.Y.L
   7 ...---...M....ER....HQH...LLSDYQQI..LTLSEQMLALATEGNWDALVDLEIT.Y.L
   8 ...---...M....ER....HQH...LLSEYQHI..LTLSEQMLAFAIEGNWDALVDLEMT.Y.L
   9 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLALAIEGNWDALVDLEMT.Y.L
  10 ...--M...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  11 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLVLATEGNWDALVDLEMT.Y.L
  12 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLMLATVENWDALVDLEMA.Y.L
  13 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  14 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  15 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  16 ...---...M....NH....APH...LYFAWQQL..VDKSQLMLRLATEEQWDELIASEMA.Y.V
  17 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDKLIASEMA.Y.V
  18 ...---...M....NN....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  19 ...---...M....NN....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  20 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  21 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLMLATVENWNTLVDLEMT.Y.L
  22 ...PIRthlM....ER....HQH...LLSEYQQI..LTLSEQMLMLATVENWNALVDLEMT.Y.L
  23 ...---...M....ER....HQH...LLSEYQQI..LTLSEQMLMLATVENWNALVDLEMT.Y.L
  24 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  25 ...---...M....NN....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  26 ...---...M....NN....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELITSEMA.Y.V
  27 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  28 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDKLIASEMA.Y.V
  29 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWEELIASEMA.Y.V
  30 ...---...M....NN....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  31 ...---...M....NH....APH...LYFAWQQL..VEKSQLMLRLATEEQWDELIASEMA.Y.V
  32 ...---...M....TS....TVE...FINRWQRI..ALLSQSLLELAQRGEWDLLLQQEVS.Y.L
  33 ...---...M....TS....TVE...FINRWQRI..ALLSQSLLELAQRGEWELLLQQEVS.Y.L
  34 ...---...M....TS....AVE...FINRWQRI..ALLSHSLLELAQRGEWDLLLEQEVT.Y.L
  35 ...---...M....TS....AVE...FINRWQRI..ALLSHSLLELAQRGEWDLLLEQEVT.Y.L
  36 ...---...M....IS....AVE...FINHWQRI..ALLSQSLLELAQRGEWDLLLEQEVT.Y.L
  37 ...---...M....TS....TVE...FINRWQRI..ALLSQSLLELAQRGEWDLLLQQEVS.Y.L
  38 ...---...M....DN....EMD...LLSAYQQI..LSLSEQMLNLAKNEKWDELVDMEIT.Y.L
  39 ...---...M....TS....TVE...FINRWQRI..ALLSQSLLELAQRGEWDLLLQQEVS.Y.L
  40 ...---...M....DN....KMD...LLSAYQRI..LSLSEQMLNLAKNEKWDELVDMEIT.Y.L
  41 ...---...X....TS....TVE...FINRWQRI..ALLSQSLLELAQRGEWDLLLQQEVS.Y.L
  42 ...---...M....ER....QQQ...LLAAYQQI..HSLSSQMIALAQTERWEDLVELELA.Y.V
  43 ...---...M....ER....QQQ...LLSAYQQI..YTLSSQMIALAKTGHWDQLVELELT.Y.V
  44 ...---...M....ER....QQQ...LLAAYQQI..YVLSSQMLALAQTERWEDLVELELA.Y.V
  45 ...---...M....TI....APH...LIAIYQQL..LDLSQGMLRLAADGEWDELITKEME.Y.V
  46 ...---...M....AS....PHR...LLKDYQQL..LSLSQKILHLAVSGQWDTLVEQEIV.Y.V
  47 ...---...M....AS....PHR...LLKDYQQL..LSLSQKILHLAVSGQWDTLVEQEIV.Y.V
  48 ...---...M....TS....PVE...FISRWQRV..ALLSQSLLELAERGEWNLLLEQEVT.Y.L
  49 ...---...M....YG....LPP...LLQAYHQV..LALSERMRDLAKQDQWEALIALEVD.Y.I
  50 ...---...M....YG....LPP...LLQAYHQV..LVLSERMRDLAQRDEWEALIALEVE.Y.L
  51 ...---...M....SN....APQ...LYALYQQL..LEQSQLMLRLARQGLWDDLIICETD.Y.V
  52 ...---...M....AS....PHR...LLKDYQQL..LSLSQKILHLAVNGQWDTLVEQEIV.Y.V
  53 ...---...M....MN....EQE...IICLYENV..ATITDQMLAAARVGDWEELTALEQR.C.A
  54 ...---...M....ND....FIS...SLNNWQAL..YALSNTMLSLANSGQWDELIEQEVK.Y.V
  55 ...---...M....NE....-QE...VIHLYENV..ATITQQMLSAAREGDWDRLAALETR.C.S
  56 ...---...M....KN....DLD...LLSAYQRI..LSLSEQMIDLAKNGKWDELVEMEIT.Y.L
  57 ...EKS...Mtal.TQ....HAP...VLEIYQDI..ANLTSRMLAAANASNWDLVLNHGQE.Y.V
  58 ...---...M....PN....AQY...LFALYQDI..LNHSQSMLRLAANSQWEELTDREVNhY.L
  59 ...---...M....VS....PHR...LLKDYQQL..LSLSQKILHLAISGQWDTLVEQEIV.Y.V
  60 ...MTA...L....TQ....HAP...VLEIYQDI..ANLTSRMLAAANASNWDLVLNHGQE.Y.V
  61 ...---...M....DA....HKS...ALICYQQI..LELSDRMLQLAMQSEWEKLIELEQE.Y.L
  62 ...---...M....ND....FIS...SLNNWQAL..YALSNTMLSLANSGQWDELIEQEVK.Y.V
  63 ...---...M....KN....DLD...LLSAYQRI..LSLSEQMLDLAKNEQWDELVDMEIT.Y.L
  64 ...---...M....TN....FIP...SLTDWHAL..HALSITMLDLAHSGKWDELIEQEMN.Y.V
  65 ...---...M....NN....ARY...LFALYQDI..LTHSQSMLRLAANSQWEELTNREVNhY.L
  66 k..DNQ...V....NNkk..PTD...LYEIYRDV..LALSENLVALAEAQQWEQLVAHETE.Y.V
  67 ...---...M....TS....PPRpacVLDIYREI..ATLTDEMLAAARAGDWGVVLACGQR.Y.C
  68 ...---...M....TS....NAE...YFARYEAI..AAISCRMLIAARRALWNDLVHLQEE.Y.R
  69 ...---...M....ND....SSL...SLKKWHAL..SALSNTMLSLAQSGKWDELIEQEVA.Y.V
  70 ...---...M....TS....NAE...YFARYEAV..AALSCRMLMAARRALWDDLVDLQDE.Y.R
  71 ...---...M....NG....KAQ...YFASYEAL..AAVSGQMLSAARAADWSVLPALQVE.F.L
  72 ...---...M....NS....AQY...LFALYQDI..LTHSQCMLRLAANNQWEELIDSEVNhY.L
  73 ...---...M....TS....NAE...YFARYEAI..AALSCRMLMAARRALWNDLVHLQEE.Y.R
  74 ...---...M....TS....NAE...YFARYEAI..AALSCRMLTAARRALWNDLVHLQEE.Y.R
  75 ...---...M....NR....KEQ...YFARYEAI..AAVSGRMLHAARGADWNALSGLQEE.Y.L
  76 ...---...M....NH....KAE...YFARYEAL..AAVSGRMLCAARGADWSALPGLQAE.F.M
  77 ...---...-....--....-MD...IMAAYEQV..LKLSEQMLTLAKNQQWDQLIEMEMD.Y.L
  78 k..DNQ...Vdn..KN....PIY...LLEIYRNV..LILSENLVSLAQSGEWETLISRETE.Y.V
  79 ...---...M....TS....NAE...YFARYEAI..AALSCRMLMAARRALWNDLVHLQDE.Y.R
  80 ...EKSxtaL....TQ....HAP...VLEIYQDI..ANLTSRXLAAANASNWDLVLNHGQE.Y.V
  81 k..DNQ...Vdn..KN....PLY...LLEVYRNV..LILSENLVALAKSGEWETLISRETD.Y.V
  82 ...---...M....NL....KAE...YFARYEAL..AAVSGRMLSAARGADWSALPELQAE.F.L
  83 ...---...M....TS....NAE...YFARYEAI..AAISCRMLTAARRALWNDLVHLQEE.Y.R
  84 ...---...M....NL....KAE...YFARYEAL..AAVSGRMLSAARGADWSALPELQAE.F.L
  85 ...---...M....NL....KAE...YFARYEAL..AAVSGRMLSAARGADWSALPELQDE.F.L
  86 ...---...M....NN....PAS...ALDNWQAL..YNLSLTMLKHARSGLWDELITLEIS.Y.V
  87 ...---...M....TS....NAE...YFARYEAV..AALSCRMLIAARRALWNDLVHLQEE.Y.R
  88 ...---...-....--....-MD...IMAAYEHV..LKSSEQMLTLAKDQQWDKLIEMEMD.Y.L
  89 ...---...M....NR....KAD...YFARYEAL..AAVSGRMLRAARGADWHALSALQDE.Y.L
  90 ...---...M....NL....KAE...YFARYEAL..AAVSGRMLCAARGADWSALPGLQAE.F.M
  91 ...---...M....NR....KAD...YFARYEAL..AAVSGRMLRAARGADWHALSGLQDE.Y.L
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 132 QLVDGL.KEAD..PG.....V.A..LDESDLGRKLDLIRRILADDAAIRDLASPDVARLSALFEA
 133 QQVATL.KLTE..NA.....L.P..LPSDVRARKLASIKSILADDREIRNIVSPWMVRLNSLMNS
 134 VLIEQL.RQRA..RS.....E.E..LDAASRAEKTRIMQRILHNDAQIRYLAEPWLAHFEQRFEG
 135 VLIEQL.RFRS..RD.....E.K..LAPELRKEKARIMQRILRNDAQIRVLAEPWLASFEHMFDG
 136 VLIEQL.RLKS..HD.....E.P..LAPDQRKEKARIMQRILRNDAQIRTLAEPWLAQFEHMFDG
 137 ALVAQL.ESAE..A-.....V.R..LPQDMQRQKVELIHKILADDAAIREYTEPWIRQVQALLGT
 138 VLISQL.KHAA..TE.....R.R..LGSEEAQLKARIMQRILVNDAEIRHLAEPWLEDLDQMMAG
 139 ERIKRA.DENK..CD.....E.P..LREPEQKIKYSHLKRILDSDREIRNIIDPWMVRLSDILTN
 140 VLINQL.KQAA..AT.....R.E..LGADERQLKTRIMKRILVNDAEVRTLAEPWLEDLDQLL--
 141 VLIEQL.RARA..HS.....E.E..LLPAQRTEKTRIMQRILHNDAQIRYLAEPWLTHCEQNLDG
 142 VLIEQL.RFRS..RD.....E.K..LAPELRKEKARIMQRILRNDAQIRVLAEPWLASFEHMFDG
 143 RKVEEI.KPRD..I-.....V.P..SNPEERAQKLALLKKILADDADIRSRTESWMEQLQRIMQS
 144 RLIHEL.QAIKeaQQ.....T.E..LNEKERSQHIGYLKKILADDAAIRDITEPRLKQLEEFLRA
 145 ADVEKL.RREP..ES.....D.R..LTEQERRHCAELLEEILEHDRAIRERLDARCEELSQLIGS
 146 VLIGQL.RFQA..QL.....Q.P..LRPEQRREKSRIMQRILRNDARIRCLAEPWLARCEQLLAD
 147 IDAERL.QQLE..AG.....V.S..LGRQERLRKAELLKQILALDAEIRTHLLARRDELVLLMRN
 148 QYLVRI.QSAE..AS.....A.P..LNDSSRQRIVGLIRKILDDDTEISKLTQAWMGQLQTSLNS
 149 QSIETV.MEKQ..TP.....P.G..ITRSIQDMVAGYIKQTLDNEQLLKGLLQQR----------
 150 TAVSST.AKLM..SQ.....A.N..PTPTQQEDLRQVLKQILLNETHVKQRLQARMDELRQLIGN
 151 AEVEHL.RQLD..HD.....A.P..FSDAERMRRYQLLDRILTYDARIRDLAMPRLKRLGNLLTS
 152 VLIEQL.RFKS..QD.....Q.Q..LLPEHRREKTRIMQRILRNDAEIRCLAEPWLAQFEHLFE-
 153 QSIETV.MEKQ..TP.....P.G..ITRSIQDMVAGYIKQTLDNEQLLG----------------
 154 QLVESI.SSNP..IT.....S.C..-PPAQVEQARFLLKKILENENELKALLQSRMDELRNLIGQ
 155 QAVEQV.TALG..SI.....A.G..LSKPLSHQLTELLQAILTNENAIRQLMERQMNELAQLIKQ
 156 ITLREA.IEHI..QS.....A.G..MATYEEEGRMNDIEQLLKNEKEIRALIGTRLTTLEQDMGQ
 157 ALREAA.RGNT..WGam8alA.R..LPPADAAELREGIARLLALDAEIRSHTDPFLSSVRKLLSA
 158 DELRRQ.AAAS..QG.....T.P..APGEEVD-LAATIRRILELDGEIRTHAEPAYESTRKLLSG
 159 ------.----..--.....-.-..MTRSIQDMVAGYIKQTLDNEQLLKGLLQQRLDELSSLIGQ
 160 ITLHDI.IE-N..QP.....A.E..MMQDEKKNLSVMLTSLLENEDEITKTLKSRLDVLRKDMSS
 161 ALAHSL.-PAT..LT.....S.D..LSRASEERARLVIEACLRCDLSIRPLVEARLNELRVVLRA
 162 DLLHEA.MQLD..SS.....A.-..LSPEELAAARELMTTLQNNEALMVQRMRARLDQLREEMSG
 163 QLVDRL.KAVG..A-.....V.S..LDAAQLEQVRGLIARIHADQDEVCALVKPQLERLVAKMAQ
 164 VNLQAL.IE-T..QP.....T.E..MIPDEKKSLGMIITSLLENEDEITKVLEERLDVLKQDISS
 165 ELARAI.DPSS..VH.....A.P..---DLQQALVTRLRRITDMDDQLRPLLEGRLEELGRTLLD
 166 QSIETV.MEKQ..TP.....P.G..ITRSIQDMVAGYIKQTLDNEQLLKGLLTTS----------
 167 -AVEA-.RGAG..NG.....VaA..LSGGQRLRKIDLLKQILANDREIRDLTDPWMNNIPGMARQ
 168 QSIETV.MEKQ..TP.....-.-..----------------------------------------
 169 ------.----..--.....-.-..---------------------LLKGLLQQRLDELSSLIGQ


      00           110                120            
      |             |                  |            
   1 STK..QQAVNNTY..GQF..P....DHA...LLLG.E..T...Q...
   2 STR..QQVVNNTY..GQF..P....DHA...LLLG.E..T...Q...
   3 STR..QQAVNNTY..GQF..P....DHA...LLLG.E..T...Q...
   4 STR..QQAVNNTY..GQF..P....DHA...LLLG.E..T...Q...
   5 STR..QQSVNNTY..GQF..P....DHA...LLLG.E..T...Q...
   6 STR..QQVVNNTY..GQF..P....DHA...LLLG.E..T...Q...
   7 STR..QQAVNNTY..GQF..P....DHA...LLLG.E..T...Q...
   8 STR..QQVVNNTY..GQF..P....DHA...LLLG.E..T...Qq..
   9 STR..QQAVNNTY..GQF..P....DHA...LLLG.E..T...Q...
  10 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nf..S...
  11 STK..QQAVNNTY..GQF..P....DHA...LLLG.E..T...Q...
  12 STR..QQAVNRTY..GQF..P....DQA...LLLG.E..T...Q...
  13 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nf..S...
  14 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  15 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nf..S...
  16 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  17 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  18 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  19 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  20 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..N...Fl..
  21 STR..QQAVNRTY..GQF..P....DQA...LLLG.E..T...Q...
  22 STR..QQAVNRTY..GQF..P....DQA...LLLG.E..T...Q...
  23 STR..QQAVNRTY..GQF..P....DQA...LLLG.E..T...Q...
  24 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..S...
  25 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  26 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  27 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  28 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  29 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  30 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  31 SSV..QKSVLSAY..GDQ..G....GFV...LAPQ.D..Nl..F...
  32 STR..QKSLNNAY..GRL..S....GML...LVPD.A..P...Gas.
  33 STR..QKSLNNAY..GRL..S....GML...LVPD.A..P...Gas.
  34 STR..QKTLNNAY..GRL..S....GML...LVPD.A..P...Tspq
  35 STR..QKTLNNAY..GRL..S....GML...LVPD.A..P...Tapq
  36 STR..QKTLNNAY..GRL..S....GML...LVPD.A..P...Salq
  37 STR..QKSLNNAY..GRL..S....GML...LVPD.A..S...Gas.
  38 AGR..QQLLNDSY..GQF..Pv...EPY...HTLT.E..H...K...
  39 STR..QKSLNYAY..GRL..S....GML...LVPD.A..P...Gas.
  40 ASQ..QQLLNDSY..GQF..P....VEP...----.-..-...-...
  41 STR..QKSLNNAY..GRL..S....GXL...LVPD.A..P...Gas.
  42 STR..QNVVNSTY..GQF..N....DRA...LLLG.E..P...Qir.
  43 STR..QNVVNSTY..GQF..H....DRA...LLLG.E..P...Qir.
  44 STR..QSVVNSTY..GQF..H....DRA...LLLG.E..P...Qir.
  45 SSR..QKSMMSAY..GKQ..G....S-V...LVPR.Q..T...V...
  46 SLK..QKSINTTY..SEF..A....GQR...LLPG.E..P...Apge
  47 SLK..QKSINTTY..SEF..A....GQR...LLPG.E..P...Apge
  48 STR..QKSINHAY..GHL..S....GML...LVPK.A..P...Fvqq
  49 GNR..QQALSHAY..GQF..T....GEI...LLPG.E..H...L...
  50 GSR..QQALSHAY..GQF..T....GGI...LLPG.E..Q...L...
  51 SSI..QKTVLSTY..GNQ..G....GHV...LVPQ.S..N...Sdin
  52 SLK..QKSINTTY..NEF..A....GQR...MLPG.DalP...De..
  53 TGT..ERKLNHAY..GAG..Q....S--...----.-..-...-...
  54 NGN..QKSLVSAY..GKL..S....GNV...LMPN.D..F...Nq..
  55 TGT..ERRLNQAY..GPN..-....---...----.-..-...-...
  56 ESC..KQLLHDTY..GQF..PasdyEME...LIMT.E..P...K...
  57 MKR..QQSLLATYs.GKA..N....GT-...----.-..-...-...
  58 AGR..QKSVNSAY..SQS..A....GVV...LFPT.R..A...N...
  59 SLK..QKSINATY..SEF..A....GQR...RLLD.D..PlpdE...
  60 MKR..QQSLLATYs.GKA..N....GT-...----.-..-...-...
  61 STR..QQSVNAAY..HKFs.S....GNS...MLPG.G..G...Kr..
  62 NGN..QKSLVTAY..GNL..S....GNV...LMPN.D..L...Nq..
  63 ESC..KQLLHDTY..GQF..PvsdyEME...LTTT.E..P...K...
  64 TGK..QQSVSTTY..GNL..A....GNI...LFPS.N..L...Nq..
  65 AGR..QKSVNSAY..SQS..A....GVV...LFPT.R..Th..G...
  66 LDQ..KRALNNSY..GQFneP....DTP...ITIK.P..I...E...
  67 MKR..QQSLLSAY..GAR..T....STA...----.-..-...-...
  68 GRP..TRVLKELY..GAR..-....---...----.-..-...-...
  69 TGK..QKNVNITY..GRL..S....GNV...LFPG.E..I...Nq..
  70 GRM..TRVLKELY..GAR..-....---...----.-..-...-...
  71 RRS..SRVLTDLY..RAR..G....---...----.-..-...-...
  72 NSR..QKSVNNAY..SKS..A....GVV...LFPT.R..I...Sg..
  73 -RP..SRVLKELY..GAR..-....---...----.-..-...-...
  74 -RP..SRVLKELY..GAR..-....---...----.-..-...-...
  75 QRS..TKVLTDLY..QAR..G....---...----.-..-...-...
  76 RRS..TQVLTDLY..RAR..G....---...----.-..-...-...
  77 TEQ..EQRVQNSY..GQF..S....EHS...YYPDlN..L...K...
  78 LDQ..QKVLNNSY..GQFdqP....DAP...RVIK.P..L...E...
  79 -RP..SRVLKELY..GAR..-....---...----.-..-...-...
  80 XKR..QQSLLATYs.GKA..N....GT-...----.-..-...-...
  81 LDQ..QKVLNNSY..GQFdeP....DTP...RVIK.P..L...E...
  82 RRS..TKVLTDLY..RAR..G....---...----.-..-...-...
  83 GRP..THVLKELY..GAR..-....---...----.-..-...-...
  84 RRS..TKVLTDLY..RAR..G....---...----.-..-...-...
  85 RRS..TKVLTDLY..RAR..G....---...----.-..-...-...
  86 TGK..QQSITSTY..GKL..S....GNI...LYPE.S..L...Trdt
  87 GRP..TRVLKELY..GAR..-....---...----.-..-...-...
  88 TEQ..EQRVQNSY..GQF..T....EHS...YYPDlN..L...K...
  89 RRS..TKVLTELY..RTR..G....---...----.-..-...-...
  90 RRS..TQVLTDLY..RAR..G....---...----.-..-...-...
  91 RRS..TKVLTELY..RTR..G....---...----.-..-...-...
  92 RRS..TKVLTELY..RTR..G....---...----.-..-...-...
  93 ARR..ASNASLAY..GSM..A....RF-...----.-..-...-...
  94 SLA..QQNINTAY..GEF..S....E--...----.-..-...-...
  95 NRR..TRNLQQTY..QPI..N....TI-...----.-..-...-...
  96 ARR..ASSASLAY..GTM..A....RF-...----.-..-...-...
  97 RRS..TKVLTDLY..RAR..G....---...----.-..-...-...
  98 ARR..ASSASLAY..GTM..A....RF-...----.-..-...-...
  99 ERR..AIGARQAY..AAV..S....YY-...----.-..-...-...
 100 SRP..AIVLKELY..QAR..-....---...----.-..-...-...
 101 HDH..KRKLGQTY..QTD..T....---...----.-..-...-...
 102 MKR..QQSLLATY..GGK..G....G--...----.-..-...-...
 103 LDQ..KRVLNNSY..GQFdeP....DTP...LVVR.P..M...E...
 104 ARR..ASTASNAY..GSM..A....RF-...----.-..-...-...
 105 MKR..QQTLLSAY..GYQ..A....---...----.-..-...-...
 106 ARR..RRDVNEAY..GVS..A....---...----.-..-...-...
 107 STQ..QQNIMTSY..GNM..A....GNI...LYPK.E..-...Q...
 108 SQN..QKSVNNTY..AEF..S....NDI...L-PG.K..P...Qs..
 109 GSR..QQALSHAY..GQF..T....GEI...LLPG.E..H...L...
 110 SRR..QIELSAAY..GAT..A....---...----.-..-...-...
 111 SQN..QKSVNNAY..AEF..S....NDI...LTGK.P..Q...P...
 112 GRS..T--LKDLY..RAR..G....---...----.-..-...-...
 113 ARR..SIGARQAY..AAV..S....YY-...----.-..-...-...
 114 ARR..SIGARQAY..AAV..S....YY-...----.-..-...-...
 115 GRS..T--LKDLY..RAR..G....---...----.-..-...-...
 116 GRS..T--LKDLY..RAR..G....---...----.-..-...-...
 117 SRR..QFDLSAAY..GAT..A....---...----.-..-...-...
 118 SQN..QKSINNTY..AEF..S....DDI...L-PG.K..P...Qp..
 119 GRS..T--LKDLY..RAR..G....---...----.-..-...-...
 120 TRV..GQRGMAAY..GAQ..R....A--...----.-..-...-...
 121 STR..QQAVNRTY..GQF..P....DQA...LLLG.E..T...Q...
 122 YGH..KRKLGQTY..QTD..S....---...----.-..-...-...
 123 NSN..ERRLGSSY..RQ-..-....---...----.-..-...-...
 124 GRS..TRMLKDIY..QAR..R....---...----.-..-...-...
 125 ARR..SIGARQAY..AAV..S....YY-...----.-..-...-...
 126 QPQmmH-------..---..-....---...----.-..-...-...
 127 QPM..--IVH---..---..-....---...----.-..-...-...
 128 QPQmmH-------..---..-....---...----.-..-...-...
 129 --R..QPMIMH--..---..-....---...----.-..-...-...
 130 NQT..ERRLTQAY..SQ-..-....---...----.-..-...-...
 131 QPQmmH-------..---..-....---...----.-..-...-...
 132 LAL..--------..---..-....---...----.-..-...-...
 133 LHM..ENKLTRAY..NQ-..-....---...----.-..-...-...
 134 QR-..-QFLH---..---..-....---...----.-..-...-...
 135 QPH..---VMH--..---..-....---...----.-..-...-...
 136 QPH..AMH-----..---..-....---...----.-..-...-...
 137 ASR..SRCVRQAYesGAW..-....---...----.-..-...-...
 138 RPR..N-VLH---..---..-....---...----.-..-...-...
 139 NTA..NRQMFDTY..KQLirP....---...----.-..-...-...
 140 AGR..PKMLH---..---..-....---...----.-..-...-...
 141 QR-..-QFLH---..---..-....---...----.-..-...-...
 142 QPH..---VMH--..---..-....---...----.-..-...-...
 143 TRS..EQRLQQTYl.AN-..-....---...----.-..-...-...
 144 ANN..SQKLSNSY..GSN..-....---...----.-..-...-...
 145 SRR..QQALMRAY..NQG..Q....GKLsqrMRPS.P..G...Tegr
 146 R--..--------..---..-....---...----.-..-...-...
 147 SRR..QRELNRAY..RPAvdS....SIV...YRIA.D..R...Sdkg
 148 NRQ..ELRLNQVY..GAG..-....---...----.-..-...-...
 149 ---..--------..---..-....---...----.-..-...-...
 150 GSR..QQALSMPM..GSS..P....ARS...CCPA.S..T...Ynht
 151 SRR..QIELSAAY..GAT..A....---...----.-..-...-...
 152 --R..QPMIMH--..---..-....---...----.-..-...-...
 153 ---..--------..---..-....---...----.-..-...-...
 154 TGK..QQSITSTY..GKL..S....GNI...LYPE.S..L...Trdt
 155 TAQ..QQQLQSRY..GEF..E....---...----.-..-...-...
 156 LRH..SSQGNNTY..HRQllQ....---...----.-..-...-...
 157 GRQ..ERALRDAY..GAS..S....R--...----.-..-...-...
 158 AVQ..HRNVRNAY..GSL..G....G--...----.-..-...-...
 159 STR..QKSLNNAY..GRL..S....GML...LVPD.A..P...Gas.
 160 LQH..GKKCSKAYs.SQY..T....S--...----.-..-...-...
 161 ERP..AA------..---..-....---...----.-..-...-...
 162 LNK..GKAVSNAY..AAP..-....---...----.-..-...-...
 163 LQN..RSDLGKAY..G-L..P....H--...----.-..-...-...
 164 LYQ..GQKCNKAYl.SQF..T....SIY...H---.-..-...-...
 165 ARK..GAAGNRAY..QRF..R....GD-...----.-..-...-...
 166 ---..--------..---..-....---...----.-..-...-...
 167 ---..--------..---..-....---...----.-..-...-...
 168 ---..--------..---..-....---...----.-..-...-...
 169 STR..QKSLNNAY..GRL..S....GML...LVPD.A..P...Gas.