Best Alignments for T0590

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2c4xA	8.6193e-14	2c4xA/T0590-2c4xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1l0qA	2.8681e-12	1l0qA/T0590-1l0qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.3.1 b.69.2.3
1b4rA	9.7464e-10	1b4rA/T0590-1b4rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.3.1
2yrlA	2.3354e-03	2yrlA/T0590-2yrlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wgoA	1.4667e-02	1wgoA/T0590-1wgoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.3.1
2wg3C	2.9245e-02	2wg3C/T0590-2wg3C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e7mA	2.1425e-01	2e7mA/T0590-2e7mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1f6fB	2.3657e+00	1f6fB/T0590-1f6fB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
2kpnA	2.6757e+00	2kpnA/T0590-2kpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hnfA	3.1006e+00	1hnfA/T0590-1hnfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1 b.1.1.3
3c12A	3.4512e+00	3c12A/T0590-3c12A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3l5iA	4.2180e+00	3l5iA/T0590-3l5iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fnf	4.9107e+00	1fnf/T0590-1fnf-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hnf	4.9767e+00	1hnf/T0590-1hnf-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1epfA	5.0969e+00	1epfA/T0590-1epfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.4 b.1.1.4
3duhA	5.2898e+00	3duhA/T0590-3duhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.4 b.1.2.1 b.1.2.1
2iepA	5.6051e+00	2iepA/T0590-2iepA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fnhA	6.0571e+00	1fnhA/T0590-1fnhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1 b.1.2.1
1cwvA	6.9865e+00	1cwvA/T0590-1cwvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
1f42A	7.1817e+00	1f42A/T0590-1f42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.4 b.1.2.1 b.1.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001