Best Alignments for T0590

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2c4xA	6.1646e-10	2c4xA/T0590-2c4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1l0qA	1.2455e-09	1l0qA/T0590-1l0qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.3.1 b.69.2.3
1b4rA	5.0019e-06	1b4rA/T0590-1b4rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.3.1
2e7mA	7.5528e-05	2e7mA/T0590-2e7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yrlA	1.7701e-04	2yrlA/T0590-2yrlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wgoA	1.8053e-02	1wgoA/T0590-1wgoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.3.1
2wg4B	6.8718e-02	2wg4B/T0590-2wg4B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o26U	1.8599e-01	2o26U/T0590-2o26U-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vcaA	2.0365e-01	1vcaA/T0590-1vcaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.3 b.1.1.4
3ejjX	2.6931e-01	3ejjX/T0590-3ejjX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w1nA	6.1047e-01	2w1nA/T0590-2w1nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2v5mA	6.6481e-01	2v5mA/T0590-2v5mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3l5jA	7.9586e-01	3l5jA/T0590-3l5jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3grwA	8.2274e-01	3grwA/T0590-3grwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3jz7A	9.1748e-01	3jz7A/T0590-3jz7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3l5iA	9.5266e-01	3l5iA/T0590-3l5iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cwvA	9.9352e-01	1cwvA/T0590-1cwvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
2x10A	1.1322e+00	2x10A/T0590-2x10A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hnfA	1.2004e+00	1hnfA/T0590-1hnfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1 b.1.1.3
2kpnA	1.2886e+00	2kpnA/T0590-2kpnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001