Best Alignments for T0590

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1l0qA/T0590-1l0qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l0qA/T0590-1l0qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0961e-113.57e-39 b.1.3.1
b.69.2.3
2c4xA/T0590-2c4xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c4xA/T0590-2c4xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6053e-081.99e-21
1b4rA/T0590-1b4rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b4rA/T0590-1b4rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8053e-054.00e-17 1b4rA b.1.3.1
2yrlA/T0590-2yrlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2yrlA/T0590-2yrlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8575e-029.16e-10
2kpnA/T0590-2kpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2kpnA/T0590-2kpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8116e+001.03e-07
3c12A/T0590-3c12A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3c12A/T0590-3c12A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0163e+007.34e-08
1cvsC/T0590-1cvsC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cvsC/T0590-1cvsC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5002e+003.91e-10 1cvsC b.1.1.4
b.1.1.4
1fsoA/T0590-1fsoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fsoA/T0590-1fsoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6196e+005.83e-09 1rhoA b.1.18.8
1fhgA/T0590-1fhgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fhgA/T0590-1fhgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4815e+007.97e-11 1tlk b.1.1.4
2jllA/T0590-2jllA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2jllA/T0590-2jllA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6738e+001.43e-12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001