Best Alignments for T0590

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1l0qA/T0590-1l0qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l0qA/T0590-1l0qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5401e-123.14e-38 b.1.3.1
b.69.2.3
2c4xA/T0590-2c4xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c4xA/T0590-2c4xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6309e-091.43e-20
1b4rA/T0590-1b4rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b4rA/T0590-1b4rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5395e-041.30e-15 1b4rA b.1.3.1
2yrlA/T0590-2yrlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2yrlA/T0590-2yrlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2967e-036.82e-11
3ejjX/T0590-3ejjX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ejjX/T0590-3ejjX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6607e-011.06e-08
1cs6A/T0590-1cs6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cs6A/T0590-1cs6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4654e+001.72e-12 1cs6A b.1.1.4
b.1.1.4
b.1.1.4
b.1.1.4
3kldA/T0590-3kldA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kldA/T0590-3kldA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5415e+001.79e-10
2jllA/T0590-2jllA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2jllA/T0590-2jllA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7258e+001.03e-12
1oflA/T0590-1oflA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oflA/T0590-1oflA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8901e+002.04e+04
3l5hA/T0590-3l5hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3l5hA/T0590-3l5hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0138e+003.71e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001