# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2drhA	361	4.85e-43		
1b65A	375	2.02e-41	d.154.1.1	42020
3lmbA	165	17.95		
2vzwA	149	19.35		
2iw2A	494	19.61		
3f6cA	134	19.95		
1uwzA	136	22.29	c.97.1.1	108081
2jg1A	330	30.73		
1w26A	432	34.13	a.223.1.1,d.241.2.1,d.26.1.1	109085,109086,109087
3l0qA	554	37.46		
1xl3C	92	37.80	a.243.1.1	122104
2bonA	332	39.17	e.52.1.2	146163
3hlfA	432	43.00		
1t82A	155	44.28	d.38.1.5	106639
3iefA	233	45.32		
1ualA	274	46.20	c.116.1.4	88383
3lmmA	583	47.70		
1t3lA	337	53.84	b.34.2.1,c.37.1.1	106358,106359
2fr5A	146	57.93	c.97.1.1	133965
2ffyA	358	60.40	e.3.1.1	133394
1x45A	98	62.32	b.36.1.1	121679
3knuA	253	64.01		
3fkjA	347	65.89		
1wyjA	125	67.06		
3eqzA	135	71.81		
1vpqA	273	73.92	c.1.32.1	113974
2qmqA	286	76.64		
1ajsA	412	78.44	c.67.1.1	34276
1yqsA	349	79.67	e.3.1.1	123899
3gwzA	369	81.09		
3lp8A	442	81.21		
2z3hA	130	82.83	c.97.1.1	153998
1v54C	261	87.94	f.25.1.1	100324
3l52A	284	89.95