# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2drhA	361	5.44e-41		
1b65A	375	1.15e-39	d.154.1.1	42020
3lmbA	165	18.50		
2vzwA	149	21.04		
2jg1A	330	23.90		
2iw2A	494	25.07		
1uwzA	136	25.29	c.97.1.1	108081
1yqsA	349	26.86	e.3.1.1	123899
3l0qA	554	28.22		
1w26A	432	32.58	a.223.1.1,d.241.2.1,d.26.1.1	109085,109086,109087
2hujA	140	34.29	a.24.26.1	136777
2ffyA	358	36.02	e.3.1.1	133394
1w44A	331	36.73	c.37.1.11	114147
1vpqA	273	37.05	c.1.32.1	113974
2vhjA	331	38.04		
1t82A	155	40.80	d.38.1.5	106639
3f6cA	134	55.34		
1xl3C	92	61.56	a.243.1.1	122104
3hlfA	432	64.79		
2bonA	332	64.85	e.52.1.2	146163
1kx5B	102	67.06	a.22.1.1	77594
2bwvA	440	69.22	c.55.2.1,d.127.1.1	129387,129388
3knuA	253	69.62		
2fr5A	146	70.86	c.97.1.1	133965
3d7eO	505	71.47		
3sil	379	72.10		
1ywnA	316	72.17	d.144.1.7	124161
3ezwA	526	74.91		
1ie7C	570	80.04	b.92.1.1,c.1.9.2	62315,62316
3lmmA	583	80.32		
1ualA	274	80.66	c.116.1.4	88383
3i7jA	280	82.21		
1t3lA	337	83.99	b.34.2.1,c.37.1.1	106358,106359
2qmqA	286	84.47		
1x45A	98	85.54	b.36.1.1	121679
3gwzA	369	87.36		
3lp8A	442	87.43		
1zbmA	280	89.78	c.94.1.1	124858