# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2drhA	361	3.29e-44		
1b65A	375	9.20e-43	d.154.1.1	42020
3lmbA	165	16.56		
1wyjA	125	18.15		
3lmmA	583	19.83		
1t82A	155	23.32	d.38.1.5	106639
2bonA	332	27.12	e.52.1.2	146163
2vzwA	149	27.74		
2iw2A	494	31.50		
1x45A	98	50.62	b.36.1.1	121679
2fr5A	146	51.92	c.97.1.1	133965
1uwzA	136	52.91	c.97.1.1	108081
2oifA	162	59.37		
1t3lA	337	59.95	b.34.2.1,c.37.1.1	106358,106359
3f6cA	134	68.28		
3hnoA	419	69.21		
1w26A	432	69.25	a.223.1.1,d.241.2.1,d.26.1.1	109085,109086,109087
3l0qA	554	69.30		
3sil	379	70.18		
1vpqA	273	80.37	c.1.32.1	113974
3l52A	284	81.38		
2h5cA	198	81.75	b.47.1.1	136145
2jg1A	330	84.71		
2bwvA	440	87.75	c.55.2.1,d.127.1.1	129387,129388
2ee9A	95	88.57		
2omzB	105	89.51	b.1.6.1	148890