# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2drhA	361	2.63e-34		
1b65A	375	5.70e-32	d.154.1.1	42020
1bx4A	345	8.972	c.72.1.1	34935
1gsoA	431	28.68	b.84.2.1,c.30.1.1,d.142.1.2	28240,31647,41492
2h5yA	254	38.22		
1v5xA	203	40.28	c.1.2.4	100377
2ksmA	131	41.53		
2kgsA	132	49.84		
2izzA	322	50.18		
2qhpA	296	64.45		
1wn5A	130	66.06	c.97.1.1	121082
1izlB	472	76.62	i.5.1.1	76995
1zwyA	185	83.93	c.51.4.3	125753
3f6kA	685	85.30		
1xbbA	291	87.89	d.144.1.7	115077
1nsjA	205	89.20	c.1.2.4	28560