# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2drhA	361	5.19e-37		
1b65A	375	1.71e-34	d.154.1.1	42020
1bx4A	345	11.32	c.72.1.1	34935
2x41A	721	30.67		
2kgsA	132	36.49		
1lw7A	365	42.03	c.26.1.3,c.37.1.1	74295,74296
1v5xA	203	44.66	c.1.2.4	100377
2ksmA	131	54.36		
2r5fA	264	61.18	c.124.1.8	151590
1a6qA	382	61.44	a.159.1.1,d.219.1.1	75801,75802
1zwyA	185	62.89	c.51.4.3	125753
3bmxA	642	62.99		
2x42A	721	65.20		
3f6kA	685	66.50		
2g0qA	173	70.32		
3lwbA	373	70.44		
2wylA	360	74.35		
2r85A	334	75.03	c.30.1.8,d.142.1.9	151676,151677
3jrqA	326	81.69		
1zjaA	557	88.38		
1pbeA	394	88.78	c.3.1.2,d.16.1.2	30338,37869