# List of top-scoring protein chains for T0586.t04-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2wv0A	243	2.32e-08		
3ic7A	126	5.95e-08		
3by6A	126	2.05e-07		
2ek5A	129	9.55e-07		
2ra5A	247	4.39e-06	d.190.1.2	151819
3bwgA	239	0.000122	a.4.5.6,d.190.1.2	155693,155694
3eetA	272	0.000146		
3edpA	236	0.000731		
1v4rA	102	0.000948	a.4.5.6	119835
1e2xA	243	0.001633	a.4.5.6,a.78.1.1	16113,18443
1hw1A	239	0.001654	a.4.5.6,a.78.1.1	16111,18441
2di3A	239	0.002014		
3fmsA	209	0.002484		
2hs5A	239	0.004836	a.4.5.6,a.78.1.1	147379,147380
3f8mA	248	0.02732		
3c7jA	237	0.03664		
3ihuA	222	0.1132		
2h09A	155	1.204		
2d1hA	109	5.512	a.4.5.50	131125
1lj9A	144	6.469	a.4.5.28	78035
3bpvA	138	9.217		
2v7fA	150	11.18	a.4.5.84	152721
3bpxA	148	14.21		
2b0lA	102	15.29	a.4.5.66	127641
1q1hA	110	15.38	a.4.5.41	95580
1o5lA	213	20.40	b.82.3.2	92506
2fbhA	146	26.75	a.4.5.28	133245
2a61A	145	30.30	a.4.5.28	126187
3deuA	166	30.35	a.4.5.28	157600
1xs5A	241	31.00	c.94.1.1	115912
3h3uA	224	34.16		
3d0sA	227	34.76		
1vdwA	254	35.03	e.7.1.1	100569
1j5yA	187	35.03	a.4.5.1,d.94.2.1	71592,71593
3i54A	249	38.84		
3eyyA	145	41.90		
3hrsA	214	46.88		
2ev0A	142	66.09	a.4.5.24,a.76.1.1	132413,132414
3e3mA	355	73.75		
2zcwA	202	74.08		
1on2A	142	74.56	a.4.5.24,a.76.1.1	87103,87104
2kvoA	120	87.18