# TARGET T0586 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0586.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 1171 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 S 0.041 0.003 0.005 0.004 0.128 0.819 2 N 0.267 0.017 0.017 0.008 0.152 0.540 3 A 0.384 0.021 0.015 0.005 0.106 0.470 4 M 0.608 0.014 0.008 0.005 0.066 0.299 5 N 0.702 0.015 0.005 0.003 0.051 0.224 6 P 0.663 0.055 0.005 0.004 0.053 0.220 7 T 0.291 0.024 0.016 0.006 0.540 0.123 8 F 0.036 0.004 0.030 0.010 0.855 0.065 9 H 0.009 0.003 0.017 0.004 0.938 0.030 10 A 0.007 0.008 0.010 0.006 0.925 0.044 11 D 0.021 0.013 0.006 0.024 0.404 0.532 12 K 0.118 0.082 0.008 0.116 0.285 0.391 13 P 0.107 0.012 0.004 0.144 0.096 0.637 14 I 0.123 0.015 0.010 0.727 0.027 0.099 15 Y 0.116 0.007 0.017 0.799 0.021 0.040 16 S 0.044 0.001 0.013 0.893 0.016 0.033 17 Q 0.020 0.001 0.013 0.939 0.010 0.016 18 I 0.006 0.001 0.006 0.972 0.005 0.011 19 S 0.002 0.001 0.002 0.991 0.002 0.003 20 D 0.001 0.001 0.001 0.994 0.002 0.002 21 W 0.001 0.001 0.001 0.992 0.002 0.003 22 M 0.001 0.001 0.001 0.997 0.001 0.001 23 K 0.001 0.001 0.001 0.997 0.001 0.001 24 K 0.001 0.001 0.001 0.994 0.003 0.002 25 Q 0.001 0.001 0.002 0.988 0.004 0.005 26 M 0.001 0.001 0.003 0.982 0.007 0.007 27 I 0.001 0.001 0.008 0.967 0.014 0.010 28 T 0.003 0.001 0.011 0.746 0.083 0.156 29 G 0.007 0.001 0.008 0.043 0.236 0.705 30 E 0.066 0.024 0.008 0.023 0.273 0.606 31 W 0.090 0.108 0.007 0.015 0.259 0.522 32 K 0.017 0.015 0.007 0.009 0.871 0.082 33 G 0.006 0.002 0.036 0.032 0.889 0.035 34 E 0.005 0.002 0.027 0.016 0.921 0.030 35 D 0.029 0.033 0.028 0.027 0.826 0.057 36 K 0.048 0.051 0.012 0.066 0.195 0.629 37 L 0.018 0.037 0.010 0.095 0.131 0.710 38 P 0.012 0.008 0.053 0.455 0.113 0.359 39 S 0.006 0.006 0.020 0.814 0.026 0.127 40 V 0.001 0.001 0.006 0.986 0.004 0.004 41 R 0.001 0.001 0.003 0.990 0.005 0.001 42 E 0.001 0.001 0.003 0.983 0.011 0.002 43 M 0.001 0.001 0.004 0.983 0.011 0.001 44 G 0.001 0.001 0.006 0.970 0.021 0.002 45 V 0.001 0.001 0.012 0.945 0.034 0.009 46 K 0.001 0.001 0.015 0.903 0.052 0.030 47 L 0.001 0.001 0.012 0.704 0.114 0.168 48 A 0.002 0.003 0.002 0.022 0.132 0.839 49 V 0.013 0.011 0.002 0.012 0.147 0.815 50 N 0.020 0.008 0.002 0.024 0.114 0.831 51 P 0.001 0.001 0.018 0.921 0.029 0.030 52 N 0.002 0.001 0.012 0.959 0.018 0.009 53 T 0.001 0.001 0.006 0.985 0.006 0.003 54 V 0.001 0.001 0.001 0.999 0.001 0.001 55 S 0.001 0.001 0.001 0.999 0.001 0.001 56 R 0.001 0.001 0.001 0.999 0.001 0.001 57 A 0.001 0.001 0.001 0.999 0.001 0.001 58 Y 0.001 0.001 0.001 0.999 0.001 0.001 59 Q 0.001 0.001 0.001 0.998 0.001 0.001 60 E 0.001 0.001 0.001 0.996 0.003 0.001 61 L 0.001 0.001 0.002 0.991 0.006 0.001 62 E 0.001 0.001 0.009 0.967 0.018 0.006 63 R 0.001 0.001 0.011 0.912 0.047 0.029 64 A 0.008 0.001 0.012 0.620 0.136 0.223 65 G 0.008 0.001 0.001 0.009 0.102 0.881 66 Y 0.320 0.009 0.002 0.005 0.099 0.564 67 I 0.884 0.008 0.001 0.003 0.031 0.073 68 Y 0.923 0.005 0.001 0.003 0.026 0.042 69 A 0.881 0.007 0.003 0.002 0.030 0.077 70 K 0.601 0.023 0.008 0.004 0.225 0.140 71 R 0.198 0.005 0.008 0.003 0.517 0.269 72 G 0.094 0.003 0.004 0.001 0.575 0.323 73 M 0.406 0.031 0.003 0.001 0.292 0.266 74 G 0.692 0.019 0.002 0.002 0.064 0.221 75 S 0.902 0.005 0.001 0.004 0.022 0.065 76 F 0.910 0.007 0.002 0.005 0.023 0.053 77 V 0.809 0.011 0.004 0.011 0.045 0.121 78 T 0.430 0.012 0.011 0.018 0.193 0.336 79 S 0.041 0.006 0.016 0.031 0.331 0.576 80 D 0.011 0.005 0.033 0.060 0.437 0.454 81 K 0.007 0.005 0.126 0.318 0.395 0.150 82 A 0.011 0.006 0.111 0.515 0.246 0.112 83 L 0.014 0.007 0.092 0.623 0.190 0.074 84 F 0.013 0.003 0.055 0.641 0.185 0.103 85 D 0.015 0.005 0.036 0.716 0.145 0.082 86 Q 0.013 0.004 0.029 0.740 0.127 0.086 87 L 0.010 0.004 0.022 0.764 0.097 0.103 88 K 0.008 0.003 0.016 0.786 0.073 0.114 89 K 0.004 0.001 0.009 0.867 0.045 0.075 90 E 0.002 0.001 0.006 0.869 0.040 0.082 91 L 0.001 0.001 0.010 0.890 0.034 0.063 92 A 0.001 0.001 0.011 0.908 0.031 0.047 93 D 0.001 0.001 0.009 0.913 0.034 0.042 94 A 0.001 0.001 0.007 0.923 0.027 0.042 95 I 0.001 0.001 0.006 0.929 0.018 0.045 96 T 0.001 0.001 0.002 0.970 0.008 0.020 97 E 0.001 0.001 0.001 0.981 0.008 0.010 98 R 0.001 0.001 0.001 0.980 0.008 0.011 99 F 0.001 0.001 0.001 0.984 0.006 0.008 100 L 0.001 0.001 0.001 0.974 0.012 0.012 101 E 0.001 0.001 0.002 0.971 0.018 0.010 102 E 0.001 0.001 0.002 0.978 0.013 0.005 103 A 0.001 0.001 0.007 0.964 0.021 0.008 104 K 0.001 0.001 0.037 0.915 0.035 0.012 105 S 0.001 0.001 0.048 0.874 0.056 0.020 106 I 0.002 0.001 0.022 0.757 0.098 0.120 107 G 0.001 0.001 0.001 0.004 0.056 0.938 108 L 0.003 0.008 0.001 0.001 0.051 0.937 109 D 0.001 0.001 0.001 0.002 0.030 0.966 110 D 0.001 0.001 0.033 0.932 0.020 0.015 111 Q 0.001 0.001 0.033 0.949 0.014 0.004 112 T 0.001 0.001 0.027 0.966 0.006 0.001 113 A 0.001 0.001 0.001 0.996 0.001 0.002 114 I 0.001 0.001 0.001 0.999 0.001 0.001 115 E 0.001 0.001 0.001 0.998 0.001 0.001 116 L 0.001 0.001 0.001 0.999 0.001 0.001 117 L 0.001 0.001 0.001 0.998 0.001 0.001 118 I 0.001 0.001 0.002 0.994 0.003 0.001 119 K 0.001 0.001 0.003 0.977 0.013 0.007 120 R 0.001 0.001 0.003 0.942 0.031 0.023 121 S 0.001 0.003 0.007 0.884 0.058 0.047 122 R 0.004 0.004 0.014 0.654 0.162 0.163 123 N 0.005 0.002 0.017 0.406 0.163 0.408 124 H 0.003 0.003 0.008 0.101 0.107 0.779 125 E 0.001 0.003 0.015 0.159 0.113 0.709