# TARGET T0586 # Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 7 (1 EBGHSTL ) # The input amino acid frequencies were determined from # alignment T0586.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 1171 # Pos AA E B G H S T C 10N 1S 5N 5N 5N 5N 5N 5N 5N 1 S 0.177 0.018 0.043 0.007 0.110 0.059 0.586 2 N 0.391 0.012 0.018 0.003 0.074 0.039 0.463 3 A 0.668 0.007 0.007 0.002 0.057 0.021 0.238 4 M 0.827 0.016 0.002 0.002 0.018 0.003 0.132 5 N 0.875 0.007 0.001 0.001 0.008 0.001 0.107 6 P 0.846 0.032 0.001 0.001 0.009 0.002 0.110 7 T 0.506 0.025 0.003 0.002 0.018 0.011 0.435 8 F 0.035 0.005 0.017 0.004 0.112 0.759 0.067 9 H 0.007 0.004 0.022 0.004 0.169 0.720 0.075 10 A 0.009 0.005 0.012 0.014 0.414 0.412 0.135 11 D 0.014 0.003 0.002 0.011 0.285 0.355 0.330 12 K 0.108 0.032 0.001 0.034 0.375 0.013 0.438 13 P 0.240 0.158 0.001 0.088 0.036 0.005 0.472 14 I 0.080 0.009 0.007 0.756 0.021 0.011 0.115 15 Y 0.022 0.001 0.004 0.926 0.009 0.009 0.028 16 S 0.005 0.001 0.002 0.967 0.010 0.005 0.009 17 Q 0.003 0.001 0.001 0.976 0.008 0.004 0.008 18 I 0.001 0.001 0.001 0.990 0.002 0.003 0.004 19 S 0.001 0.001 0.001 0.994 0.002 0.002 0.001 20 D 0.001 0.001 0.001 0.995 0.001 0.003 0.001 21 W 0.001 0.001 0.001 0.995 0.001 0.003 0.001 22 M 0.001 0.001 0.001 0.995 0.001 0.002 0.002 23 K 0.001 0.001 0.001 0.996 0.001 0.003 0.001 24 K 0.001 0.001 0.001 0.993 0.001 0.006 0.001 25 Q 0.001 0.001 0.001 0.990 0.001 0.006 0.002 26 M 0.001 0.001 0.001 0.986 0.003 0.007 0.003 27 I 0.001 0.001 0.004 0.943 0.002 0.046 0.003 28 T 0.001 0.001 0.004 0.485 0.011 0.493 0.006 29 G 0.004 0.002 0.003 0.104 0.168 0.519 0.200 30 E 0.012 0.029 0.003 0.007 0.210 0.050 0.689 31 W 0.028 0.120 0.006 0.006 0.075 0.007 0.759 32 K 0.010 0.007 0.012 0.003 0.036 0.018 0.915 33 G 0.001 0.003 0.110 0.014 0.094 0.739 0.039 34 E 0.002 0.003 0.091 0.015 0.104 0.746 0.040 35 D 0.014 0.015 0.069 0.031 0.206 0.111 0.555 36 K 0.067 0.123 0.011 0.046 0.104 0.038 0.611 37 L 0.048 0.016 0.002 0.022 0.189 0.024 0.699 38 P 0.040 0.019 0.005 0.053 0.281 0.054 0.549 39 S 0.047 0.084 0.004 0.225 0.147 0.023 0.470 40 V 0.001 0.001 0.005 0.981 0.004 0.005 0.005 41 R 0.001 0.001 0.003 0.988 0.001 0.005 0.003 42 E 0.001 0.001 0.001 0.992 0.001 0.005 0.001 43 M 0.001 0.001 0.001 0.992 0.002 0.003 0.002 44 G 0.001 0.001 0.002 0.990 0.002 0.004 0.002 45 V 0.001 0.001 0.003 0.979 0.001 0.015 0.001 46 K 0.001 0.001 0.007 0.906 0.003 0.084 0.001 47 L 0.002 0.001 0.007 0.457 0.061 0.454 0.019 48 A 0.003 0.009 0.007 0.040 0.107 0.625 0.208 49 V 0.006 0.079 0.002 0.014 0.260 0.011 0.628 50 N 0.003 0.001 0.001 0.007 0.045 0.002 0.941 51 P 0.001 0.001 0.051 0.878 0.014 0.052 0.005 52 N 0.001 0.001 0.017 0.953 0.008 0.020 0.003 53 T 0.001 0.001 0.013 0.969 0.003 0.008 0.005 54 V 0.001 0.001 0.001 0.992 0.002 0.002 0.003 55 S 0.001 0.001 0.001 0.992 0.001 0.005 0.001 56 R 0.001 0.001 0.001 0.994 0.001 0.004 0.001 57 A 0.001 0.001 0.001 0.997 0.001 0.002 0.001 58 Y 0.001 0.001 0.001 0.998 0.001 0.001 0.001 59 Q 0.001 0.001 0.001 0.997 0.001 0.002 0.001 60 E 0.001 0.001 0.001 0.995 0.001 0.004 0.001 61 L 0.001 0.001 0.001 0.994 0.001 0.003 0.001 62 E 0.001 0.001 0.003 0.979 0.001 0.013 0.003 63 R 0.001 0.001 0.008 0.848 0.006 0.132 0.004 64 A 0.001 0.001 0.003 0.085 0.006 0.904 0.002 65 G 0.001 0.001 0.002 0.008 0.031 0.936 0.022 66 Y 0.179 0.008 0.003 0.007 0.057 0.014 0.733 67 I 0.807 0.022 0.004 0.006 0.014 0.003 0.143 68 Y 0.888 0.005 0.004 0.006 0.013 0.004 0.079 69 A 0.828 0.007 0.006 0.009 0.020 0.013 0.117 70 K 0.734 0.007 0.007 0.007 0.059 0.051 0.135 71 R 0.359 0.004 0.011 0.006 0.204 0.225 0.190 72 G 0.199 0.005 0.011 0.004 0.385 0.215 0.181 73 M 0.465 0.013 0.010 0.004 0.107 0.058 0.343 74 G 0.766 0.008 0.005 0.003 0.058 0.027 0.134 75 S 0.859 0.008 0.003 0.004 0.024 0.006 0.095 76 F 0.870 0.014 0.002 0.005 0.014 0.004 0.091 77 V 0.694 0.022 0.004 0.013 0.029 0.010 0.228 78 T 0.370 0.019 0.012 0.026 0.098 0.046 0.428 79 S 0.070 0.007 0.031 0.075 0.288 0.257 0.271 80 D 0.022 0.006 0.039 0.081 0.248 0.262 0.343 81 K 0.012 0.006 0.091 0.390 0.124 0.127 0.250 82 A 0.013 0.007 0.077 0.549 0.089 0.130 0.134 83 L 0.011 0.005 0.069 0.641 0.064 0.090 0.118 84 F 0.006 0.003 0.039 0.740 0.038 0.064 0.110 85 D 0.005 0.001 0.018 0.820 0.037 0.052 0.067 86 Q 0.005 0.001 0.013 0.853 0.032 0.048 0.049 87 L 0.003 0.002 0.010 0.876 0.025 0.041 0.043 88 K 0.002 0.001 0.008 0.886 0.014 0.047 0.042 89 K 0.001 0.001 0.004 0.935 0.014 0.029 0.017 90 E 0.001 0.001 0.003 0.936 0.014 0.030 0.016 91 L 0.001 0.001 0.004 0.935 0.009 0.032 0.018 92 A 0.001 0.001 0.005 0.947 0.007 0.022 0.018 93 D 0.001 0.001 0.003 0.967 0.006 0.018 0.005 94 A 0.001 0.001 0.002 0.960 0.005 0.028 0.005 95 I 0.001 0.001 0.001 0.965 0.003 0.023 0.007 96 T 0.001 0.001 0.001 0.983 0.004 0.007 0.006 97 E 0.001 0.001 0.001 0.993 0.002 0.004 0.001 98 R 0.001 0.001 0.001 0.996 0.001 0.003 0.001 99 F 0.001 0.001 0.001 0.998 0.001 0.002 0.001 100 L 0.001 0.001 0.001 0.998 0.001 0.001 0.001 101 E 0.001 0.001 0.001 0.997 0.001 0.002 0.001 102 E 0.001 0.001 0.001 0.996 0.001 0.003 0.001 103 A 0.001 0.001 0.001 0.996 0.001 0.002 0.001 104 K 0.001 0.001 0.001 0.992 0.001 0.005 0.001 105 S 0.001 0.001 0.008 0.897 0.003 0.091 0.001 106 I 0.001 0.001 0.005 0.163 0.005 0.826 0.001 107 G 0.001 0.001 0.002 0.005 0.011 0.960 0.021 108 L 0.001 0.007 0.001 0.001 0.055 0.002 0.933 109 D 0.008 0.011 0.001 0.001 0.021 0.001 0.957 110 D 0.001 0.001 0.038 0.901 0.027 0.020 0.014 111 Q 0.001 0.001 0.016 0.963 0.005 0.011 0.004 112 T 0.001 0.001 0.009 0.979 0.002 0.006 0.003 113 A 0.001 0.001 0.001 0.994 0.001 0.003 0.001 114 I 0.001 0.001 0.001 0.994 0.001 0.004 0.001 115 E 0.001 0.001 0.001 0.991 0.001 0.007 0.001 116 L 0.001 0.001 0.001 0.990 0.002 0.005 0.003 117 L 0.001 0.001 0.001 0.991 0.002 0.004 0.003 118 I 0.001 0.001 0.001 0.990 0.002 0.006 0.002 119 K 0.001 0.001 0.001 0.978 0.003 0.013 0.004 120 R 0.001 0.001 0.001 0.960 0.006 0.023 0.008 121 S 0.001 0.002 0.003 0.887 0.014 0.071 0.022 122 R 0.001 0.002 0.006 0.656 0.033 0.254 0.048 123 N 0.002 0.002 0.007 0.298 0.100 0.471 0.119 124 H 0.004 0.009 0.012 0.169 0.008 0.248 0.551 125 E 0.001 0.001 0.001 0.001 0.001 0.001 0.998