PFRMAT SS
TARGET T0585
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0585.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1109
METHOD
MODEL 1
S C 0.684
N T 0.391
A T 0.507
S T 0.466
F C 0.353
R E 0.892
V E 0.949
V E 0.967
L E 0.928
D E 0.477
P T 0.563
G T 0.683
H T 0.691
G T 0.642
G T 0.586
I T 0.574
D T 0.624
G T 0.549
G T 0.498
A T 0.475
R C 0.279
G T 0.726
V T 0.860
T T 0.849
G T 0.717
I E 0.457
L E 0.662
E E 0.539
K H 0.425
D H 0.499
V H 0.912
T H 0.977
L H 0.989
A H 0.994
F H 0.995
A H 0.998
R H 0.997
A H 0.996
L H 0.995
R H 0.995
D H 0.992
E H 0.993
L H 0.982
Q H 0.954
K H 0.806
G T 0.698
S T 0.754
H T 0.815
T E 0.572
I E 0.937
V E 0.991
A E 0.986
L E 0.955
T E 0.802
R E 0.460
D T 0.691
S T 0.811
D T 0.796
I T 0.607
F C 0.471
L C 0.538
R C 0.840
L H 0.921
S H 0.966
E H 0.980
R H 0.992
V H 0.992
K H 0.992
K H 0.991
A H 0.987
Q H 0.984
E H 0.938
F H 0.825
D C 0.605
A C 0.551
D C 0.549
L E 0.937
F E 0.991
I E 0.992
S E 0.986
I E 0.900
H E 0.771
A E 0.461
D T 0.593
T T 0.725
I T 0.637
D T 0.661
V T 0.742
H T 0.716
S T 0.656
L T 0.658
R T 0.505
G T 0.461
A E 0.691
T E 0.915
V E 0.958
Y E 0.950
T E 0.921
I E 0.618
S T 0.486
D T 0.672
E T 0.674
A T 0.539
S C 0.360
D H 0.535
A H 0.814
I H 0.860
A H 0.901
K H 0.941
S H 0.957
L H 0.953
A H 0.929
E H 0.907
S H 0.909
E H 0.806
N H 0.637
K H 0.755
V H 0.770
D H 0.779
L H 0.738
L H 0.748
D H 0.762
G C 0.608
L C 0.538
P T 0.454
K T 0.589
E T 0.514
E T 0.473
S C 0.426
L C 0.570
E H 0.631
L H 0.837
T H 0.889
D H 0.908
I H 0.902
L H 0.929
L H 0.910
D H 0.847
L H 0.856
T H 0.891
R H 0.777
R H 0.787
E H 0.692
T H 0.700
H H 0.651
A H 0.753
F H 0.849
S H 0.890
I H 0.916
N H 0.986
F H 0.989
A H 0.990
N H 0.988
N H 0.987
V H 0.992
V H 0.989
S H 0.973
N H 0.970
L H 0.973
S H 0.957
K H 0.907
S H 0.862
H H 0.795
I C 0.395
N C 0.611
L T 0.429
I T 0.478
N T 0.524
N T 0.453
P T 0.346
H E 0.463
R E 0.457
Y E 0.409
A T 0.470
D T 0.399
F E 0.741
Q E 0.940
V E 0.952
L E 0.899
K E 0.669
A T 0.594
P T 0.804
D T 0.700
V T 0.463
P C 0.755
S E 0.914
V E 0.990
L E 0.994
I E 0.991
E E 0.984
I E 0.934
G E 0.832
Y E 0.723
L E 0.516
S C 0.517
N C 0.840
K H 0.931
E H 0.952
D H 0.957
E H 0.951
K H 0.920
L H 0.855
L H 0.798
N H 0.571
N C 0.897
P H 0.933
Q H 0.976
W H 0.987
R H 0.998
K H 1.000
Q H 0.999
M H 1.000
A H 1.000
A H 1.000
S H 0.999
I H 0.999
A H 0.999
Y H 0.998
S H 0.994
I H 0.997
R H 0.996
Q H 0.996
F H 0.993
A H 0.978
E H 0.958
Y H 0.859
R C 0.560
Q C 0.671
K T 0.445
I T 0.413
M C 0.541
Q C 0.463
P C 0.667
L C 0.942
END