PFRMAT SS
TARGET T0585
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0585.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1109
METHOD
MODEL 1
S C 0.449
N C 0.478
A T 0.407
S T 0.351
F C 0.659
R C 0.484
V E 0.877
V E 0.959
L E 0.940
D E 0.547
P C 0.553
G S 0.401
H S 0.390
G S 0.373
G C 0.409
I C 0.224
D C 0.280
G T 0.660
G T 0.765
A E 0.325
R E 0.515
G C 0.408
V T 0.617
T T 0.836
G T 0.343
I C 0.482
L E 0.494
E C 0.355
K H 0.519
D H 0.721
V H 0.909
T H 0.980
L H 0.986
A H 0.995
F H 0.996
A H 0.997
R H 0.996
A H 0.993
L H 0.989
R H 0.987
D H 0.977
E H 0.959
L H 0.920
Q H 0.746
K H 0.507
G C 0.486
S T 0.686
H T 0.775
T C 0.697
I E 0.862
V E 0.979
A E 0.986
L E 0.969
T E 0.766
R C 0.500
D S 0.351
S S 0.414
D C 0.453
I S 0.319
F C 0.397
L C 0.581
R C 0.863
L H 0.905
S H 0.942
E H 0.962
R H 0.987
V H 0.983
K H 0.971
K H 0.971
A H 0.961
Q H 0.880
E H 0.782
F T 0.481
D T 0.895
A C 0.949
D S 0.782
L E 0.981
F E 0.997
I E 0.997
S E 0.979
I E 0.806
H E 0.535
A C 0.455
D E 0.372
T C 0.296
I T 0.331
D S 0.357
V C 0.453
H T 0.336
S C 0.290
L C 0.335
R T 0.438
G E 0.291
A E 0.796
T E 0.970
V E 0.984
Y E 0.976
T E 0.922
I E 0.669
S C 0.490
D S 0.410
E S 0.339
A H 0.253
S H 0.411
D H 0.668
A H 0.832
I H 0.909
A H 0.955
K H 0.968
S H 0.973
L H 0.974
A H 0.966
E H 0.939
S H 0.885
E H 0.812
N H 0.698
K H 0.717
V H 0.701
D H 0.707
L H 0.710
L H 0.713
D T 0.478
G T 0.625
L C 0.655
P C 0.520
K T 0.341
E T 0.290
E C 0.277
S C 0.302
L C 0.427
E H 0.726
L H 0.899
T H 0.947
D H 0.957
I H 0.957
L H 0.948
L H 0.929
D H 0.878
L H 0.804
T H 0.753
R H 0.653
R H 0.547
E H 0.544
T H 0.500
H H 0.491
A H 0.707
F H 0.789
S H 0.801
I H 0.894
N H 0.960
F H 0.967
A H 0.974
N H 0.989
N H 0.990
V H 0.991
V H 0.991
S H 0.988
N H 0.977
L H 0.963
S H 0.946
K H 0.902
S H 0.842
H H 0.786
I H 0.394
N C 0.369
L C 0.517
I C 0.442
N C 0.303
N C 0.294
P C 0.352
H C 0.346
R E 0.318
Y E 0.313
A C 0.351
D C 0.376
F E 0.760
Q E 0.940
V E 0.951
L E 0.920
K E 0.646
A C 0.470
P C 0.353
D S 0.447
V S 0.556
P C 0.675
S E 0.741
V E 0.901
L E 0.923
I E 0.895
E E 0.835
I E 0.522
G E 0.365
Y E 0.372
L C 0.281
S C 0.368
N C 0.589
K H 0.783
E H 0.840
D H 0.876
E H 0.858
K H 0.752
L H 0.560
L T 0.408
N T 0.385
N C 0.742
P H 0.856
Q H 0.909
W H 0.940
R H 0.984
K H 0.986
Q H 0.988
M H 0.992
A H 0.995
A H 0.996
S H 0.997
I H 0.999
A H 0.997
Y H 0.994
S H 0.993
I H 0.997
R H 0.997
Q H 0.993
F H 0.990
A H 0.978
E H 0.873
Y H 0.625
R C 0.434
Q C 0.740
K C 0.522
I C 0.414
M C 0.540
Q C 0.549
P C 0.835
L C 1.000
END