Best Alignments for T0581

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
3lfkA 3.6638e+01 3lfkA/T0581-3lfkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ede 5.1835e+01 1ede/T0581-1ede-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gp8A 5.3093e+01 1gp8A/T0581-1gp8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bbsA 8.4394e+01 2bbsA/T0581-2bbsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zycA 8.6518e+01 2zycA/T0581-2zycA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2furA 8.7745e+01 2furA/T0581-2furA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.45.1.1
3e5jA 8.8901e+01 3e5jA/T0581-3e5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qswA 9.0562e+01 2qswA/T0581-2qswA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2k3cA 9.4850e+01 2k3cA/T0581-2k3cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b71A 9.8214e+01 1b71A/T0581-1b71A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.25.1.1
g.41.5.1
3fppA 9.8552e+01 3fppA/T0581-3fppA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hdoA 1.0350e+02 3hdoA/T0581-3hdoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hyrA 1.0399e+02 3hyrA/T0581-3hyrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3chxA 1.0528e+02 3chxA/T0581-3chxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cedA 1.0807e+02 3cedA/T0581-3cedA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nynA 1.2461e+02 2nynA/T0581-2nynA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3by4A 1.2880e+02 3by4A/T0581-3by4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y4eA 1.3032e+02 1y4eA/T0581-1y4eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3fi7A 1.3468e+02 3fi7A/T0581-3fi7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wfxA 1.3501e+02 1wfxA/T0581-1wfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001