Best Alignments for T0581

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
2gp8A 2.9721e+01 2gp8A/T0581-2gp8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gp8A 3.2998e+01 1gp8A/T0581-1gp8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lfkA 3.4534e+01 3lfkA/T0581-3lfkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cqbA 3.6334e+01 3cqbA/T0581-3cqbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t3qA 5.0783e+01 1t3qA/T0581-1t3qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.56.1.1
d.15.4.2
3hrdD 6.0063e+01 3hrdD/T0581-3hrdD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ko6A 6.4418e+01 2ko6A/T0581-2ko6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1n62A 7.3875e+01 1n62A/T0581-1n62A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.56.1.1
d.15.4.2
1jgcA 7.6314e+01 1jgcA/T0581-1jgcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.25.1.1
3h51A 7.6951e+01 3h51A/T0581-3h51A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lf6A 8.5771e+01 1lf6A/T0581-1lf6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.102.1.5
b.30.5.5
1rm6C 8.5945e+01 1rm6C/T0581-1rm6C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.56.1.1
d.15.4.2
2k3cA 8.6650e+01 2k3cA/T0581-2k3cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2kcpA 8.7481e+01 2kcpA/T0581-2kcpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ei9A 8.8092e+01 1ei9A/T0581-1ei9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m c.69.1.13
2htiA 8.8173e+01 2htiA/T0581-2htiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.45.1.1
2ou5A 8.8402e+01 2ou5A/T0581-2ou5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3dhxA 8.9004e+01 3dhxA/T0581-3dhxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f05A 9.2115e+01 2f05A/T0581-2f05A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.59.1.1
3cedA 9.5353e+01 3cedA/T0581-3cedA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001