# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1t3qA	168	18.09	a.56.1.1,d.15.4.2	106367,106368
3hrdD	160	18.93		
3cqbA	107	21.77		
3h51A	156	22.42		
2f05A	105	29.44	a.59.1.1	132651
1n62A	166	31.39	a.56.1.1,d.15.4.2	80090,80091
1rm6C	161	33.02	a.56.1.1,d.15.4.2	111876,111877
2depA	356	36.14		
1lf6A	684	36.21	a.102.1.5,b.30.5.5	77918,77919
1pydA	556	37.62	c.31.1.3,c.36.1.5,c.36.1.9	31735,31773,31774
2kkmA	144	41.73		
3lfkA	129	44.13		
1jgcA	161	61.80	a.25.1.1	66673
1elkA	157	64.59	a.118.9.2	19217
2ou5A	175	65.55		
1oaoA	674	71.59	e.26.1.2	86744
1ei9A	279	72.77	c.69.1.13	34713
2ko6A	89	85.85		
1v9sA	208	86.41	c.61.1.1	119894
2r5kA	424	88.26		
1jroA	462	89.66	a.56.1.1,d.15.4.2,d.87.2.1,d.145.1.3	67137,67138,67139,67140