# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2cjjA	93	27.72	a.4.1.3	130540
2h2zA	306	37.88		
3d3oA	178	39.38		
1jpaA	312	47.19	d.144.1.7	67011
3fzdA	301	47.68		
2fu5C	183	48.38	c.37.1.8	134104
2dipA	98	50.40	g.44.1.6	146527
2amdA	311	58.22		
1qczA	169	59.77	c.23.8.1	31276
3a8uX	449	61.21		
3ckyA	301	61.41		
1pb7A	292	62.27	c.94.1.1	88025
2d4gA	171	63.16		
2ou3A	161	73.61	a.287.1.1	149018
2as0A	396	75.71	b.122.1.9,c.66.1.51	127227,127228
1pq1B	33	77.23		
1ehxA	94	79.30	b.1.18.13	21950
1xmpA	170	80.48	c.23.8.1	115521
1hfeL	421	83.78	c.96.1.1,d.58.1.5	36018,39001
2djfC	69	83.80		
2gnnA	127	84.82		
1nwaA	203	86.09	d.58.28.1	86295