Best Alignments for T0581

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1w9yA/T0581-1w9yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9yA/T0581-1w9yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3078e+011.44e-12 b.82.2.1
2ko6A/T0581-2ko6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ko6A/T0581-2ko6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8604e+018.48e-01
3dy0A/T0581-3dy0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3dy0A/T0581-3dy0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8642e+012.30e-13
3f8mA/T0581-3f8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f8mA/T0581-3f8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1143e+012.34e-07
2zk7A/T0581-2zk7A-simplesw-adpstyle1.a2m 2zk7A/T0581-2zk7A-simplesw-adpstyle1.al 2.6829e+013.36e+00
1g20E/1cp2A-T0581-fssp-local-adpstyle5.a2m 1g20E/1cp2A-T0581-fssp-local-adpstyle5.al 2.7610e+011.64e+04 1cp2A c.37.1.10
2vk1A/T0581-2vk1A-t04-global-adpstyle1.a2m 2vk1A/T0581-2vk1A-t04-global-adpstyle1.al 2.7862e+013.29e+00
2w93A/T0581-2w93A-t04-global-adpstyle1.a2m 2w93A/T0581-2w93A-t04-global-adpstyle1.al 2.8388e+018.63e+00
1fzdA/T0581-1fzdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fzdA/T0581-1fzdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8405e+013.53e-02 3fib d.171.1.1
3huiA/T0581-3huiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3huiA/T0581-3huiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0594e+011.30e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001