Best Alignments for T0581

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1w9yA/T0581-1w9yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9yA/T0581-1w9yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3730e+014.28e-11 b.82.2.1
2ko6A/T0581-2ko6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ko6A/T0581-2ko6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4443e+019.40e+00
3dy0A/T0581-3dy0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3dy0A/T0581-3dy0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0218e+013.24e-11
3lq9A/T0581-3lq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lq9A/T0581-3lq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0702e+013.93e-10
1fzdA/T0581-1fzdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fzdA/T0581-1fzdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8406e+015.60e-02 3fib d.171.1.1
3cqcB/T0581-3cqcB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cqcB/T0581-3cqcB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8413e+018.16e-03
1wudA/T0581-1wudA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wudA/T0581-1wudA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9492e+017.94e-07 a.60.8.1
3c1qA/T0581-3c1qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3c1qA/T0581-3c1qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1348e+013.98e-02
3f8mA/T0581-3f8mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f8mA/T0581-3f8mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2077e+011.36e-04
3huiA/T0581-3huiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3huiA/T0581-3huiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4829e+011.30e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001