Best Alignments for T0581

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1pydA/T0581-1pydA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pydA/T0581-1pydA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8500e+002.27e+04 1zpdA c.31.1.3
c.36.1.5
c.36.1.9
1w9yA/T0581-1w9yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9yA/T0581-1w9yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2625e+011.44e-12 b.82.2.1
3f8mA/T0581-3f8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f8mA/T0581-3f8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5639e+012.34e-07
3dy0A/T0581-3dy0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3dy0A/T0581-3dy0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7579e+012.30e-13
3fc7A/T0581-3fc7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3fc7A/T0581-3fc7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1883e+012.65e+01
2ko6A/T0581-2ko6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ko6A/T0581-2ko6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2343e+018.48e-01
1l8rA/T0581-1l8rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l8rA/T0581-1l8rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3866e+012.19e-02 a.6.1.4
1dgmA/T0581-1dgmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dgmA/T0581-1dgmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5900e+015.98e+01 1bx4A c.72.1.1
3huiA/T0581-3huiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3huiA/T0581-3huiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7855e+015.23e+01
1xo5A/T0581-1xo5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xo5A/T0581-1xo5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8261e+019.55e-02 a.39.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001