Best Alignments for T0578

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i6wA/T0578-1i6wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i6wA/T0578-1i6wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1020e+012.43e-05 1i6wA c.69.1.18
3e8tA/T0578-3e8tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e8tA/T0578-3e8tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3468e+017.25e-05
2h1tA/T0578-2h1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h1tA/T0578-2h1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4956e+012.84e-02 b.178.1.1
1x12A/T0578-1x12A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x12A/T0578-1x12A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6533e+014.97e+00
3l8bA/T0578-3l8bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3l8bA/T0578-3l8bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6824e+018.88e-08
3hveB/T0578-3hveB-t04-local-adpstyle1.a2m 3hveB/T0578-3hveB-t04-local-adpstyle1.al 1.8313e+012.29e+00
2ox7A/T0578-2ox7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ox7A/T0578-2ox7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9204e+011.57e+00 b.172.1.1
3lzjA/T0578-3lzjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lzjA/T0578-3lzjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1077e+017.64e-07
3gkuA/T0578-3gkuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3gkuA/T0578-3gkuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4994e+016.41e-03
3enbA/T0578-3enbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3enbA/T0578-3enbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8502e+018.54e-08 c.55.3.14

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001