PFRMAT SS
TARGET T0578
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0578.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 28
METHOD
MODEL 1
S C 0.978
N C 0.484
A H 0.447
M H 0.396
K H 0.400
K H 0.367
A H 0.555
T H 0.422
M H 0.838
L H 0.950
T H 0.948
Y H 0.963
L H 0.963
E H 0.952
E H 0.959
Q H 0.951
L H 0.890
E H 0.816
K H 0.635
H T 0.536
L C 0.385
G C 0.573
D C 0.497
Y C 0.340
E E 0.475
V E 0.887
G E 0.923
L E 0.902
D E 0.748
W C 0.392
D C 0.519
R T 0.439
K T 0.443
N S 0.417
H C 0.495
T E 0.829
I E 0.950
E E 0.984
V E 0.971
I E 0.984
V E 0.994
R E 0.996
L E 0.992
Y E 0.983
A E 0.884
E E 0.516
N C 0.670
N T 0.710
E T 0.755
Q T 0.365
V E 0.438
A E 0.852
I E 0.899
D E 0.893
D C 0.640
V T 0.797
D T 0.741
G S 0.611
T C 0.518
L B 0.350
S C 0.663
E S 0.574
E S 0.512
E C 0.526
F E 0.619
I E 0.829
E E 0.849
F E 0.776
E E 0.716
D E 0.758
G E 0.925
L E 0.972
L E 0.971
F E 0.868
Y E 0.681
N C 0.658
P T 0.619
Q T 0.620
K G 0.381
S C 0.388
V C 0.347
V C 0.472
D C 0.710
D G 0.524
E G 0.511
E G 0.504
Y C 0.426
L E 0.780
V E 0.941
T E 0.937
I E 0.890
P E 0.544
Y C 0.454
E S 0.373
G S 0.354
K C 0.306
K T 0.416
G T 0.415
L C 0.433
R H 0.602
K H 0.957
A H 0.972
V H 0.983
L H 0.994
D H 0.996
G H 0.997
F H 0.999
I H 0.999
H H 0.998
Y H 0.996
L H 0.997
K H 0.996
V H 0.989
V H 0.985
L H 0.964
D H 0.839
E T 0.561
G T 0.579
Q H 0.394
S H 0.544
D H 0.626
L H 0.867
L H 0.905
D H 0.865
F H 0.827
L H 0.615
S T 0.508
D C 0.658
E C 0.440
T T 0.361
A S 0.279
E C 0.336
V E 0.637
F E 0.886
E E 0.962
L E 0.960
H E 0.909
W E 0.673
E C 0.809
P H 0.791
A H 0.902
D H 0.919
F H 0.961
E H 0.947
A H 0.927
M H 0.911
I H 0.882
K H 0.760
K H 0.624
V H 0.533
A H 0.631
E H 0.571
T H 0.502
E H 0.371
K C 0.329
E C 0.467
Q C 0.535
W C 0.612
I C 0.758
A C 0.669
Y C 0.587
P C 0.634
S C 0.908
Y C 0.999
END