Best Alignments for T0576

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3fm2A	3.8214e-02	3fm2A/T0576-3fm2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u9tA	2.8095e-01	1u9tA/T0576-1u9tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.62.1.1
2hq2A	6.9942e-01	2hq2A/T0576-2hq2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.62.1.1
2ph0A	7.9131e-01	2ph0A/T0576-2ph0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j0pA	1.6228e+00	2j0pA/T0576-2j0pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.62.1.1
2iruA	2.1688e+01	2iruA/T0576-2iruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hqvA	2.6850e+01	2hqvA/T0576-2hqvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.62.1.2
1r2jA	4.3452e+01	1r2jA/T0576-1r2jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.3.1 e.6.1.1
3m33A	4.8552e+01	3m33A/T0576-3m33A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2waaA	5.0757e+01	2waaA/T0576-2waaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fvhA	5.4402e+01	2fvhA/T0576-2fvhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kzlA	5.6775e+01	1kzlA/T0576-1kzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wbiA	5.9252e+01	1wbiA/T0576-1wbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hdzA	6.4652e+01	2hdzA/T0576-2hdzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q8oA	6.7279e+01	2q8oA/T0576-2q8oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2wzpP	6.7500e+01	2wzpP/T0576-2wzpP-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2x53S	6.7500e+01	2x53S/T0576-2x53S-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2x54S	6.7808e+01	2x54S/T0576-2x54S-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hm0A	6.8878e+01	3hm0A/T0576-3hm0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ddyA	6.9171e+01	3ddyA/T0576-3ddyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001