# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3fm2A	135	0.2714		
2hq2A	354	0.7045	e.62.1.1	136656
2j0pA	345	1.162	e.62.1.1	137903
1u9tA	354	1.312	e.62.1.1	119651
2ph0A	174	2.072		
1r2jA	366	10.47	a.29.3.1,e.6.1.1	96869,96870
2waaA	347	14.39		
1wbiA	129	14.58		
3m33A	226	14.67		
3hm0A	167	17.33		
1u9aA	160	22.79	d.20.1.1	38333
2w3xA	147	28.34		
2p13A	90	35.18	d.145.1.4	149152
1txlA	215	36.93	b.60.1.4	107429
1iciA	256	38.42	c.31.1.5	62266
1s5uA	138	39.46	d.38.1.1	98573
3hg9A	131	41.08		
3e15A	312	42.27		
3c7fA	487	46.76		
3d59A	383	51.00		
2pii	112	52.28		
2o1rA	81	53.64	d.145.1.4	148549
2ns1B	116	56.67	d.58.5.1	145694
2p4pA	86	58.20	d.145.1.4	149217
1pieA	419	62.23	d.14.1.5,d.58.26.7	94706,94707
2plsA	86	65.97	d.145.1.4	149638
1wuuA	399	67.96	d.14.1.5,d.58.26.7	114900,114901
3llbA	83	70.62		
2o66A	135	73.63		
2hqvA	195	74.40	e.62.1.2	136674
1mzeA	351	74.53	b.82.2.6	79694
2oyyA	76	76.06		
1ogpA	393	77.57	b.1.18.6,d.176.1.1	92927,92928
2pliA	91	78.51	d.145.1.4	149630
2waoA	341	84.78		
2vezA	190	85.46		
1gnkA	112	86.63	d.58.5.1	39073
1m2kA	249	87.67	c.31.1.5	84754