Best Alignments for T0576

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
3fm2A 5.1677e+00 3fm2A/T0576-3fm2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3fg8A 8.0686e+00 3fg8A/T0576-3fg8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ph0A 2.2829e+01 2ph0A/T0576-2ph0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cnmA 2.6622e+01 3cnmA/T0576-3cnmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ff0A 2.7939e+01 3ff0A/T0576-3ff0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2kkuA 3.6224e+01 2kkuA/T0576-2kkuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hqvA 3.6549e+01 2hqvA/T0576-2hqvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m e.62.1.2
2nwaA 4.7359e+01 2nwaA/T0576-2nwaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.122.1.13
1y12A 4.7587e+01 1y12A/T0576-1y12A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.157.1.1
2j0pA 5.2242e+01 2j0pA/T0576-2j0pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m e.62.1.1
2wntA 5.8837e+01 2wntA/T0576-2wntA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2aioA 5.9485e+01 2aioA/T0576-2aioA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m d.157.1.1
2f1nA 6.2646e+01 2f1nA/T0576-2f1nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m d.151.1.1
3guaA 6.4431e+01 3guaA/T0576-3guaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2czlA 6.4982e+01 2czlA/T0576-2czlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m c.94.1.1
2it2A 6.6236e+01 2it2A/T0576-2it2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3gpuA 6.6627e+01 3gpuA/T0576-3gpuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hdzA 6.6834e+01 2hdzA/T0576-2hdzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3jrsA 6.7796e+01 3jrsA/T0576-3jrsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2khaA 6.9025e+01 2khaA/T0576-2khaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001