# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3cfuA	159	1.053		
1aop	497	4.258		
1tzaA	134	6.478	b.1.23.1	107468
1xvsA	126	9.088	b.1.23.1	116095
1lfaA	187	12.81	c.62.1.1	34122
1q7fA	286	39.85	b.68.9.1	96036
2wnxA	170	41.16		
2eodA	66	42.17		
3gztB	255	45.07		
3eypA	469	49.21		
3bleA	337	51.72		
3hn9A	123	53.50		
1caxB	184	56.75	b.82.1.2	28105
1shuX	182	59.83	c.62.1.1	98882
1v10A	521	61.02	b.6.1.3,b.6.1.3,b.6.1.3	108224,108225,108226
2g3rA	123	62.15	b.34.9.1,b.34.9.1	134570,134571
1e4fT	419	67.17	c.55.1.1,c.55.1.1	33453,33454
1zvfA	176	68.06	b.82.1.20	146029
2hhzA	150	73.27		
2fug7	129	75.35		
1cauB	184	76.36	b.82.1.2	28103
2dp9A	124	78.02	b.122.1.5	131609
1ifrA	121	80.10	b.1.16.1	71203
2cmgA	262	83.40		
2vfjA	366	85.32		
2h6oA	470	87.10		
2kreA	100	89.59