# List of top-scoring protein chains for t04-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1tzaA	134	1.942	b.1.23.1	107468
1xvsA	126	3.726	b.1.23.1	116095
1zvfA	176	6.274	b.82.1.20	146029
1e29A	135	14.37	a.3.1.1	59161
2frnA	278	14.39	c.66.1.47	133993
3cfuA	159	19.35		
3fehA	386	25.67		
1m3qA	317	25.85	a.96.1.3,d.129.1.2	91184,91185
1shuX	182	25.96	c.62.1.1	98882
2qe8A	343	32.14		
1v84A	253	32.88	c.68.1.7	108419
3crkA	407	34.40		
3gvkA	670	35.82		
1pk6C	129	36.28	b.22.1.1	94803
3gvjA	670	36.57		
1w9sA	142	37.02	b.18.1.10	114416
3ju4A	670	37.43		
2hft	218	40.68		
1ifrA	121	44.03	b.1.16.1	71203
2jc9A	555	47.02		
1sr8A	298	47.93	e.54.1.1	105959
1hbnB	442	51.78	a.89.1.1,d.58.31.2	60900,60901
1mroB	442	56.75	a.89.1.1,d.58.31.2	18531,39449
1v82A	253	60.70	c.68.1.7	108415
2gjdA	157	61.58		
2k5wA	117	62.43	b.40.13.1	148275
2fug7	129	64.14		
3c99A	432	64.19		
3ibsA	218	67.41		
3gmxA	154	68.07		
1t3cA	421	69.60	d.92.1.7	106343
1gycA	499	83.30	b.6.1.3,b.6.1.3,b.6.1.3	70748,70749,70750
2grrA	161	83.93		
1jvbA	347	86.03	b.35.1.2,c.2.1.1	77181,77182
3cfsB	414	86.78		
2a7lA	136	87.09	d.20.1.1	126350