Best Alignments for T0573

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gp6A/T0573-1gp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gp6A/T0573-1gp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6459e-399.54e-176 b.82.2.1
2g19A/T0573-2g19A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g19A/T0573-2g19A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5888e-011.18e-27
2hbtA/T0573-2hbtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hbtA/T0573-2hbtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8969e-018.33e-27
3emrA/T0573-3emrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3emrA/T0573-3emrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7211e-019.92e-19
2rdqA/T0573-2rdqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2rdqA/T0573-2rdqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1976e+003.51e-26
2rg4A/T0573-2rg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2rg4A/T0573-2rg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5040e+007.70e-26
2opwA/T0573-2opwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2opwA/T0573-2opwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6381e+003.82e-29

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001