Best Alignments for T0569

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
3i57A 1.9284e-03 3i57A/T0569-3i57A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2kt7A 1.8850e+00 2kt7A/T0569-2kt7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dp0A 4.0359e+00 1dp0A/T0569-1dp0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.1.4.1
b.1.4.1
b.18.1.5
b.30.5.1
c.1.8.3
2bgiA 8.2283e+00 2bgiA/T0569-2bgiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gvmA 1.3535e+01 1gvmA/T0569-1gvmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.109.1.1
2bmwA 1.6511e+01 2bmwA/T0569-2bmwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.43.4.2
c.25.1.1
2eixA 1.8232e+01 2eixA/T0569-2eixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3elsA 1.9081e+01 3elsA/T0569-3elsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qwnA 2.2509e+01 1qwnA/T0569-1qwnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.8.3.1
b.30.5.6
c.6.2.1
1h8gA 2.4723e+01 1h8gA/T0569-1h8gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.109.1.1
2vjxA 2.7593e+01 2vjxA/T0569-2vjxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.1.4.1
b.1.4.1
b.1.4.1
b.18.1.5
c.1.8.3
1mmuA 3.6691e+01 1mmuA/T0569-1mmuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.30.5.4
1ntvA 3.9425e+01 1ntvA/T0569-1ntvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.55.1.2
1htyA 4.0312e+01 1htyA/T0569-1htyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.8.3.1
b.30.5.6
c.6.2.1
2f6eA 4.4522e+01 2f6eA/T0569-2f6eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gvhA 4.6715e+01 1gvhA/T0569-1gvhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.1.1.2
b.43.4.2
c.25.1.5
3bemA 4.9919e+01 3bemA/T0569-3bemA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cwrA 5.3040e+01 2cwrA/T0569-2cwrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2k2sB 5.4099e+01 2k2sB/T0569-2k2sB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r4yA 5.4262e+01 1r4yA/T0569-1r4yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m d.1.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001