# List of top-scoring protein chains for T0569.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3c0uA	183	23.61		
1shkA	173	41.15	c.37.1.2	31932
3a5cH	104	49.84		
2d00A	109	51.71	c.149.1.1	146441
3f5vA	222	52.88		
1r5sA	132	57.50	f.50.1.1	111709
2kvzA	85	57.52		
1xkgA	312	64.76	d.3.1.1	122081
1e6cA	173	69.03	c.37.1.2	59296
2qxuA	179	69.07	c.69.1.18	151458
1nc7A	138	72.49	b.123.1.1	85549
1lqwA	183	73.19	d.167.1.1	74210
1gskA	513	73.78	b.6.1.3,b.6.1.3,b.6.1.3	83314,83315,83316
3d2aA	181	74.13		
1q1yA	191	74.15	d.167.1.1	104480
1t4mA	181	74.33	c.69.1.18	112243
1ispA	181	74.47	c.69.1.18	76778
1t2nA	181	74.92	c.69.1.18	112226
1lmhA	184	75.41	d.167.1.1	74036
1lm4A	194	77.67	d.167.1.1	84626
1hw7A	255	79.26	d.193.1.1	61297
1i7fA	292	80.72	d.193.1.1	61888
1x50A	164	84.93		
2fyfA	398	85.02		
2ivbA	156	85.31		
1hslA	238	86.40	c.94.1.1	35804
3g5jA	134	87.38		
2iv1A	156	88.39		
2iu7A	156	89.75	a.35.1.4,d.72.1.1	137649,137650