Best Alignments for T0569

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3i57A	9.3086e-04	3i57A/T0569-3i57A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2kt7A	5.3064e-02	2kt7A/T0569-2kt7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a8pA	8.1006e+00	1a8pA/T0569-1a8pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.2 c.25.1.1
2qdxA	1.5380e+01	2qdxA/T0569-2qdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qs8A	1.5902e+01	2qs8A/T0569-2qs8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.92.1.9 c.1.9.18
2go2A	1.7888e+01	2go2A/T0569-2go2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ybqB	2.0293e+01	1ybqB/T0569-1ybqB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ic8A	2.1389e+01	3ic8A/T0569-3ic8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gpjA	2.5449e+01	2gpjA/T0569-2gpjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gdnA	2.8556e+01	2gdnA/T0569-2gdnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v73A	3.1407e+01	1v73A/T0569-1v73A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gzbA	3.1792e+01	2gzbA/T0569-2gzbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3griA	3.4186e+01	3griA/T0569-3griA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bibA	3.5684e+01	2bibA/T0569-2bibA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.109.1.1 d.157.1.8
2v05A	4.3647e+01	2v05A/T0569-2v05A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vhlA	4.7695e+01	2vhlA/T0569-2vhlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2piaA	4.8187e+01	2piaA/T0569-2piaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.2 c.25.1.2 d.15.4.2
1dx5I	5.0454e+01	1dx5I/T0569-1dx5I-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1 g.3.11.1 g.3.11.1
2k2sB	5.0745e+01	2k2sB/T0569-2k2sB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2k2oA	5.1888e+01	2k2oA/T0569-2k2oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001