# List of top-scoring protein chains for T0569.t04-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2i3yA	215	35.03		
2b68A	43	37.00		
3kjxA	344	41.42		
3i57A	185	44.39		
2vklA	90	48.61		
3hs3A	277	55.56		
1hslA	238	55.85	c.94.1.1	35804
1nc7A	138	61.04	b.123.1.1	85549
2bmoA	447	62.60	b.33.1.2,d.129.3.3	128804,128805
2fhoA	47	64.98		
1pquA	371	78.43	c.2.1.3,d.81.1.1	104288,104289
1r5sA	132	81.05	f.50.1.1	111709
2kvzA	85	83.05		
1i7kA	179	89.69	d.20.1.1	61889