PFRMAT SS
TARGET T0565
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0565.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 977
METHOD
MODEL 1
M C 0.993
K C 0.790
K C 0.422
N C 0.693
I T 0.516
L T 0.344
L C 0.326
F C 0.463
Y C 0.368
C C 0.446
F C 0.398
L H 0.814
A H 0.835
T H 0.870
M H 0.877
A H 0.831
A H 0.770
S H 0.676
L H 0.497
K H 0.407
A H 0.367
Q C 0.333
E C 0.322
I C 0.339
R C 0.336
P C 0.289
M C 0.344
P C 0.380
A C 0.464
D T 0.508
S T 0.523
A C 0.426
Y E 0.575
G E 0.873
V E 0.955
V E 0.954
H E 0.902
I E 0.670
S E 0.501
V E 0.601
C E 0.545
N E 0.515
L E 0.365
R E 0.275
E C 0.274
E C 0.429
G C 0.511
K C 0.505
F T 0.292
T T 0.327
S C 0.298
G H 0.367
M H 0.556
S H 0.487
T H 0.528
Q H 0.484
A H 0.470
L H 0.371
L T 0.658
G T 0.631
M C 0.503
P E 0.580
V E 0.852
K E 0.951
V E 0.944
L E 0.934
Q E 0.811
Y E 0.471
N T 0.407
G T 0.485
W S 0.336
Y E 0.774
E E 0.963
I E 0.983
Q E 0.971
T E 0.929
P E 0.890
D T 0.802
D T 0.796
Y E 0.595
T E 0.891
G E 0.932
W E 0.958
V E 0.921
H E 0.682
R H 0.379
M H 0.385
V H 0.459
I H 0.498
T H 0.345
P H 0.296
M C 0.358
S C 0.509
K H 0.636
E H 0.648
R H 0.658
Y H 0.620
D H 0.576
E H 0.528
W H 0.420
N H 0.281
R T 0.247
A C 0.364
E C 0.424
K E 0.390
I E 0.717
V E 0.888
V E 0.922
T E 0.870
S E 0.721
H E 0.524
Y E 0.433
G E 0.492
F E 0.593
A E 0.606
Y E 0.520
E C 0.328
K C 0.442
P C 0.339
D C 0.414
E C 0.324
S T 0.307
S C 0.387
Q C 0.522
P C 0.394
V E 0.501
S E 0.583
D E 0.689
V E 0.605
V E 0.417
A T 0.604
G T 0.632
N C 0.375
R E 0.738
L E 0.818
K E 0.866
W E 0.846
E E 0.800
G E 0.620
S E 0.425
K T 0.302
G T 0.343
H E 0.283
F E 0.738
Y E 0.875
Q E 0.931
V E 0.875
S E 0.842
Y E 0.600
P T 0.435
D T 0.751
G T 0.349
R C 0.376
K E 0.727
A E 0.823
Y E 0.871
L E 0.779
S E 0.592
K E 0.374
S E 0.315
I E 0.387
S E 0.410
Q E 0.376
P C 0.440
E C 0.484
A C 0.323
G C 0.299
W C 0.348
R C 0.366
A C 0.422
S C 0.479
L C 0.404
K C 0.300
Q H 0.316
D H 0.410
V H 0.907
E H 0.971
S H 0.982
I H 0.994
I H 0.997
E H 0.997
T H 0.996
A H 0.995
Y H 0.981
S H 0.925
M H 0.830
M T 0.422
G T 0.502
I S 0.582
P C 0.697
Y E 0.610
L E 0.849
W E 0.835
A E 0.652
G C 0.379
T S 0.384
S C 0.537
S S 0.382
K S 0.368
G C 0.380
V C 0.507
D H 0.502
C H 0.735
S H 0.897
G H 0.942
L H 0.977
V H 0.992
R H 0.997
T H 0.998
V H 0.998
L H 0.994
F H 0.974
M H 0.875
H T 0.595
D T 0.698
I C 0.886
I C 0.745
I C 0.595
P C 0.714
R C 0.466
D C 0.528
A H 0.749
S H 0.941
Q H 0.958
Q H 0.965
A H 0.935
Y H 0.772
V T 0.744
G T 0.759
E C 0.540
H C 0.632
I C 0.790
D C 0.744
I C 0.322
A C 0.347
P C 0.460
D C 0.544
F G 0.705
S G 0.664
N G 0.443
V C 0.789
K C 0.805
R T 0.675
G T 0.774
D E 0.622
L E 0.948
V E 0.984
F E 0.976
F E 0.931
G E 0.720
R C 0.534
K T 0.547
A T 0.534
T S 0.325
A S 0.300
E T 0.318
R C 0.354
K T 0.329
E S 0.347
G C 0.454
I C 0.582
S E 0.539
H E 0.899
V E 0.935
G E 0.986
I E 0.989
Y E 0.976
L E 0.879
G E 0.537
N T 0.869
K T 0.799
Q E 0.814
F E 0.966
I E 0.978
H E 0.946
A E 0.798
L E 0.480
G S 0.291
D T 0.474
V T 0.387
H S 0.423
V E 0.572
S E 0.893
S E 0.913
M E 0.823
N E 0.495
P C 0.521
A C 0.367
D C 0.367
Q H 0.413
N H 0.687
Y H 0.782
D H 0.825
E H 0.888
F H 0.903
N H 0.860
T H 0.762
K H 0.555
R T 0.526
L C 0.377
L C 0.283
F E 0.337
A C 0.317
V C 0.323
R C 0.390
F C 0.497
L C 0.664
P C 0.469
Y C 0.423
I C 0.518
N C 0.706
K C 0.352
E G 0.307
K T 0.295
G T 0.242
M C 0.397
N C 0.415
T C 0.285
T C 0.280
N C 0.503
K C 0.398
N C 0.561
P C 0.370
F C 0.261
Y C 0.553
Q C 0.983
END