# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2ka7A	124	11.63		
3eo6A	106	13.60		
1hpcA	131	16.81	b.84.1.1	28221
1mgrA	99	22.51	d.1.1.2	79106
2ke4A	98	27.17		
1y13A	181	28.05	d.96.1.2	116319
2w9qA	87	28.32		
2fpqA	444	28.85		
1b79A	119	33.65	a.81.1.1	18451
3bf2A	152	34.99		
3a7lA	128	36.71		
1grjA	158	37.20	a.2.1.1,d.26.1.2	15691,38433
3fdwA	148	37.47		
1a2pA	110	39.16	d.1.1.2	36140
2ifcA	385	42.10		
1bdyA	123	42.89	b.7.1.1	23190
1iomA	377	43.16	a.103.1.1	83698
1zkoA	136	43.45		
3hwkA	414	44.28		
2sliA	679	45.14	b.29.1.9,b.68.1.1	24274,27611
1k3bA	119	45.44	b.61.5.1	72016
3ab9A	129	48.55		
1a59A	378	50.20	a.103.1.1	18902
1eeuA	114	51.41	b.1.1.1	20546
1grj	158	55.88		
2p2wA	367	57.79		
1vgmA	378	60.59		
3imaB	91	61.43		
1lniA	96	61.46	d.1.1.2	74046
1up7A	417	68.84	c.2.1.5,d.162.1.2	113374,113375
3e82A	364	71.82		
1he7A	126	71.88	b.1.1.4	60970
3lx3A	180	72.98		
3gfuA	224	73.09		
1g60A	260	75.23	c.66.1.11	70151
1aj8A	371	81.14	a.103.1.1	18900
3a57A	165	88.78