# List of top-scoring protein chains for t04-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2qjvA	270	17.11		
1n26A	325	21.41	b.1.1.4,b.1.2.1,b.1.2.1	79850,79851,79852
1wuuA	399	29.32	d.14.1.5,d.58.26.7	114900,114901
2ebdA	309	38.13		
1mgrA	99	43.50	d.1.1.2	79106
3dlmA	213	48.07		
3hb9A	1150	49.48		
1yn3A	98	51.38		
1htp	131	59.50		
1hpcA	131	64.07	b.84.1.1	28221
1a4aA	129	66.92	b.6.1.1	22907
3a57A	165	67.33		
2ielA	138	77.49	c.26.2.4	147649
1hq8A	123	80.08	d.169.1.1	61127
1uekA	275	80.65	d.14.1.5,d.58.26.5	88483,88484
1ymiA	334	86.34		
2pe4A	424	89.66