Best Alignments for T0564

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1z47A/T0564-1z47A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z47A/T0564-1z47A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1613e+001.28e-11
3f1zA/T0564-3f1zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f1zA/T0564-3f1zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9021e+002.05e-13
1y6kR/T0564-1y6kR-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y6kR/T0564-1y6kR-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9198e+002.28e-06 b.1.2.1
b.1.2.1
3fvqA/T0564-3fvqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3fvqA/T0564-3fvqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0268e+007.16e-09
1aihA/T0564-1aihA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aihA/T0564-1aihA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1804e+014.46e-04 1aihA d.163.1.1
1gutA/T0564-1gutA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gutA/T0564-1gutA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2382e+013.49e-14 b.40.6.1
3kf8A/T0564-3kf8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kf8A/T0564-3kf8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2412e+013.97e-08
1o7iA/T0564-1o7iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o7iA/T0564-1o7iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3383e+013.22e-08 b.40.4.3
1h9sA/T0564-1h9sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h9sA/T0564-1h9sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8489e+011.11e-10 1b9mA b.40.6.2
b.40.6.2
2amuA/T0564-2amuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2amuA/T0564-2amuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8518e+011.85e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001