Best Alignments for T0564

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1z47A/T0564-1z47A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z47A/T0564-1z47A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5917e+001.28e-11
1y6kR/T0564-1y6kR-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y6kR/T0564-1y6kR-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6039e+002.28e-06 b.1.2.1
b.1.2.1
3eo6A/T0564-3eo6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3eo6A/T0564-3eo6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2457e+001.63e-01
3fvqA/T0564-3fvqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3fvqA/T0564-3fvqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1519e+003.16e-07
1o7iA/T0564-1o7iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o7iA/T0564-1o7iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2097e+003.22e-08 b.40.4.3
3f1zA/T0564-3f1zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f1zA/T0564-3f1zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2864e+002.05e-13
3kf8A/T0564-3kf8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kf8A/T0564-3kf8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9501e+003.97e-08
1gutA/T0564-1gutA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gutA/T0564-1gutA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1912e+012.79e-11 b.40.6.1
1onqA/T0564-1onqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1onqA/T0564-1onqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3306e+014.15e-02 b.1.1.2
d.19.1.1
2glzA/T0564-2glzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2glzA/T0564-2glzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6186e+014.99e-03 d.81.3.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001